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Evidence Code List

Evidence code: Experimental Evidence
Direct: alfa-gal - wt vs. target promoter mutant
Direct: ChIP
Direct: ChiP - Wild Type vs. Memory recruitment sequence mutant
Direct: ChIP analysis
Direct: Chip assay
Direct: ChIP assay (Ash1-myc)
Direct: ChIP assay (Dsnf1 with pGADT7-Snf1-6xmyc)
Direct: ChIP assay (Hot-HA)
Direct: ChIP assay (Hot1-GFP)
Direct: ChIP assay (Hot1-HA) Wt versus Dcbc1
Direct: ChIP assay (Mbp1-HA)
Direct: ChIP assay (Mbp1-myc)
Direct: ChIP assay (Mbp1-myc)/qPCR wt versus TF mutant
Direct: ChIP assay (Mig1-GFP)
Direct: ChIP assay (Mig2-GFP)
Direct: ChIP assay (Swi4-HA)
Direct: ChIP assay (Swi4-myc)
Direct: ChIP assay (Swi4-myc)/qPCR wt versus TF mutant
Direct: ChIP assay - control vs oleate induction
Direct: ChIP assay - high vs low levels inositol+choline
Direct: ChIP assay - Wild-type vs. TF deletion mutant
Direct: ChIP assay: (Yox1 binds to the promoter but with the overexpression of Bck2, binding decreases)
Direct: ChIP assay: wt vs ∆rim101
Direct: ChIP with ufd1-1 inactivation
Direct: ChIP-chip
Direct: ChIP-chip - TF overexpression
Direct: ChIP-EXO
Direct: ChIP-on-chip
Direct: ChIP-qPCR
Direct: ChIP-qPCR (Gnc4-Flag)
Direct: ChIP-qPCR (Swi4-V5)
Direct: ChIP-qPCR - TF overexpression
Direct: ChIP-seq
Direct: ChIP: Fhl1-3HA
Direct: ChIP: Met vs Met4(K163R)
Direct: Chromatin immunoprecipitation assays: WT vs ∆ptc6 (higher fold enrichment)
Direct: Dam-Rpn4 interaction with the target gene (measuring level of methylation of the target promoter)
Direct: DamID system Wild-type vs. Mutated bingind site
Direct: DNA Footprinting
Direct: DNA footprinting - Wild type vs. target promoter mutant
Direct: DNase footprinting
Direct: EMSA
Direct: EMSA (PHM8 promoter & mutated PHM8 promoter and Gcn4p)/ Lac-Z fusion (wt vs TF mutant)/ RT-qPCR (Wt vs TF mutant)
Direct: EMSA / ChIP assay (Reb1-3X-FLAG)
Direct: Fluorescence anisotropy: in vitro protein-DNA interaction
Direct: FRAP
Direct: Immunoblot
Direct: In vivo footprinting wt vs TF mutant vs TF overexpressing mutant
Direct: In vivo UV-photofootprinting
Direct: LacZ - Wild type vs. target promoter mutant
Direct: lacZ - wt vs mutant promoter region
Direct: lacZ: wt vs mutant promoter region
Direct: lacZ: wt vs mutant promotor region
Direct: Library of genomic binding sites
Direct: Multiplex calling card analysis
Direct: Northern blotting - wt vs TFBS mutant
Direct: Oligonucleotide affinity chromatography
Direct: One-hybrid assay
Direct: PBM
Direct: qPCR-ChIP: ifh1-6 vs UTP22 repression (higher fold enrichment of Ifh1 when UTP22 is downregulated)
Direct: RT-PCR - wt vs TFBS mutant
Direct: RT-PCR Wt vs. TF binding site mutant
Direct: RT-PCR: Yap8 protein (control) vs Yap8 with L26A mutation (decrease of ACR2 expresssion)
Direct: SMT - Single molecule tracking
Direct: TF SRMA
Direct: TF SRMA (selected reaction monitoring MS Analysis)
Direct: transcription factor protein chip
Indirect: (RT)-PCR: wt vs ∆pdr1
Indirect: (RT)-PCR: wt vs ∆pdr3
Indirect: (RT)-PCR: wt vs ∆pdr8
Indirect: (RT)-PCR: wt vs ∆rdr1
Indirect: (RT)-PCR: wt vs ∆stb5
Indirect: Anti-GFP immunoblots: wt vs ∆crz1
Indirect: Anti-GFP immunoblots: wt vs ∆rim101
Indirect:  β-galactosidase assay (Wt vs. sut1Dsut2 double mutant)
Indirect: ß-Galactosidase assays: mutant vs mutant with mutation in PMR1 promoter
Indirect: b-gal - wt vs TF mutant
Indirect: CAT - Wild type vs. Mutant promoter region
Indirect: CAT - Wild type vs. TF mutant
Indirect: CAT - wt vs TF mutant
indirect: CAT - WT vs. TF mutant
Indirect: CAT activity wt vs Mutant promoter region
Indirect: Cat reporter wt ws Mutant promoter region
Indirect: Cat reporter wt ws TF mutant
Indirect: ChIP assay - inhibition of Opi1 binding to INO1 and CHO2 promoters
Indirect: ChIP assay Oaf1 binding to target promoters (POT1 and PIP2) - Wild-type vs OAF3 deletion mutant
Indirect: ChIP assay PIP2 binding to target promoters (POT1 and PIP2) - Wild-type vs OAF1 deletion mutant
Indirect: Determination of promoter strength using luciferase: ∆yap5 vs ∆yap5 with overexpression of yap1
Indirect: Determination of promoter strength using luciferase: ∆yap5 vs ∆yap5 with overexpression of yap2
Indirect: Determination of promoter strength using luciferase: ∆yap5 vs ∆yap5 with overexpression of yap3
Indirect: Determination of promoter strength using luciferase: ∆yap5 vs ∆yap5 with overexpression of yap4
Indirect: Determination of promoter strength using luciferase: ∆yap5 vs ∆yap5 with overexpression of yap6
Indirect: Determination of promoter strength using luciferase: ∆yap5 vs ∆yap5 with overexpression of yap7
Indirect: Determination of promoter strength using luciferase: ∆yap5 vs ∆yap5 with overexpression of yap8
Indirect: Determination of promoter strength using luciferase: ∆yap5 with Yap5-Cterminal Myc-tag vs ∆yap5 with Yap5-Cterminal Myc-tag variants
Indirect: DNA macroarrays - wt vs TF mutant
Indirect: Electrophoretic mobility shift assays (EMSAs)
Indirect: Enzymatic measurements
Indirect: Enzyme activity - Wild type vs. TF mutant
indirect: Enzyme activity - WT vs. mutant promoter region
Indirect: Enzyme activity - wt vs. TF mutant
Indirect: Enzyme activity - wt ws. TF mutant
indirect: Enzyme activity -WT vs. mutant promoter region
Indirect: Enzyme activity wt vs TF mutant
Indirect: Enzyme activity: wt vs TF mutant
Indirect: Flow-cytometry of HSP12-GFP expression - Wild type vs. TF mutant
Indirect: Flow-cytometry of TG promoter-YFP expression - Wild type vs. TF overexpression
Indirect: Fluorescence - Wild Type vs. TF Binding site deletion
Indirect: Gene overexpression
Indirect: GFP - wt vs TF overexpression
Indirect: GFP - wt vs. TF mutant
Indirect: GFP - wt vs. TF overexpression
Indirect: GFP expression - wt vs TF mutant
Indirect: GFP fluorescence - wt vs TF mutant
Indirect: GFP fusion - Wild type vs TF mutant
Indirect: GFP wt vs TF mutant
Indirect: GFP wt vs TF overexpression
Indirect: GFP-tagged protein expression Wild-Type vs. TF mutant
Indirect: Gus reporter wt vs TF mutant
Indirect: HIS3 fusion gene - wt vs. TF mutant
Indirect: His3-reporter - wt vs. TF mutant
Indirect: Idh1-GFP: WT vs PGAL-SOD2 (SOD2 repressed cells)
Indirect: Immunoblot - Wild type vs. TF deletion mutant
Indirect: Immunoblot analysis: DBY746 vs DBY746 pho4::LEU2
Indirect: Immunoblot analysis: wt vs ∆pho4
Indirect: Immunoblot analysis: wt vs ∆rim101
Indirect: Immunoblot analysis: wt vs ∆rpn4
Indirect: Immunoblot analysis: wt vs ∆sfp1
Indirect: Immunoblot analysis: wt vs ∆sfp1 (both with P-T737-Sch9)
Indirect: Immunoblot WT vs ∆rim101
Indirect: Invertase activity wt vs TF mutant
Indirect: Invertase activity wt vs TF overexpression
Indirect: iTRAQ - Wild type vs TF mutant
Indirect: β-gal activity - wt vs TF mutant
Indirect: β-galactosidase - Wild type vs. TF mutant
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pERG11): WT vs ∆upc2∆ecm22
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pERG11): WT vs Flo8 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pERG11): WT vs Phd1 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pERG11):WT vs Mga1 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pERG3): WT vs ∆upc2∆ecm22
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pERG3):WT vs ∆upc2∆ecm22
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of Yep367 carrying pFHN1): WT vs Ecm22 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of Yep367 carrying pFHN1): WT vs Sut1 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of Yep367 carrying pFHN1): WT vs Sut2 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of Yep367 carrying pFHN1): WT vs Upc2 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEP367 carrying pFLO11): WT vs ∆upc2∆ecm22
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pNCP1): WT vs ∆upc2∆ecm22
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pNCP1):WT vs ∆upc2∆ecm22
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pNPR1): WT vs Ecm22 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pNPR1): WT vs Upc2 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pPRR2): WT vs Ecm22 overexpression
Indirect: β-galactosidase activity assay ( lacZ reporter fused to the promoter region of YEp367 carrying pPRR2): WT vs Upc2 overexpression
Indirect: β-galactosidase activity assay ∆upc2∆ecm22 with Upc2 vs Upc2 with deletion of the ligand-binding domain
Indirect: β-galactosidase activity assay: WT vs UPC2 promoter mutant lacking TAAACGA sites
Indirect: β-galactosidase assay Wt and Dyap1
Indirect: β-galactosidase assay: wt vs ∆gis1
Indirect: β-galactosidase assay: wt vs ∆yap2
Indirect: β-galactosidase assay: wt vs mutation in HSP31 promoter AGGGG binding motif to msn2
Indirect: β-galactosidase assay: wt vs mutation in HSP31 promoter AGGGG binding motif to msn4
Indirect: β-galactosidase assay: wt vs mutation in HSP31 promoter CTTCATGAAA binding motif to hsf1
Indirect: β-galactosidase assay: wt vs mutation in HSP31 promoter GAGGCG binding motif to haa1
Indirect: β-galactosidase assay: wt vs mutation in HSP31 promoter TTACTCA binding motif to yap1
Indirect: β-galactosidase assay (Wt vs. ste12 overexpression)
Indirect: β-galactosidase assay (Wt vs. sut1 overexpression)
Indirect: β-galactosidase assay (Wt vs. sut1Dsut2 double mutant)
Indirect: β-galactosidase assay (Wt vs. sut2 overexpression)
Indirect: β-galactosidase assay (Wt vs. TF mutant)
Indirect: lacZ - mutant vs TF mutant
Indirect: LacZ - Wild type vs. TF deletion mutant
Indirect: LacZ - Wild type vs. TF everexpression
Indirect: lacZ - Wild type vs. TF mutant
Indirect: LacZ - wt vs TF mutant
Indirect: lacZ - wt vs. Mutant promoter region
Indirect: lacZ - wt vs. TF mutant
Indirect: lacZ - wt vs. TF overexpression
Indirect: LacZ Expression - Wild-type vs. TF deletion mutant
Indirect: LacZ fusion - TF overexpression (absence of pheromone) vs TF overexpression (pheromone)
Indirect: LacZ fusion - Wild type promoter vs mutated promoter
Indirect: LacZ fusion - Wild type vs TF mutant
Indirect: lacZ reporter assays: wt vs ∆crz1∆cnb1
Indirect: lacZ reporter assays: wt vs ∆nrg1∆nrg2∆mig1∆mig2
Indirect: lacZ wt TF mutant
Indirect: lacZ wt vs hyperactive TF
Indirect: lacZ wt vs TF mutant
Indirect: lacZ wt vs TF overexpression
Indirect: LacZ wt vs TF overexpression mutant
Indirect: lacZ: wt vs TF mutant
Indirect: lacZ: wt vs TF overexpression
Indirect: luciferase - wt vs. TF mutant
Indirect: Luciferase assay (PMSH2-luciferase)
Indirect: Luciferase fusion - Wild type vs TF mutant
Indirect: Luciferase wt vs Mutant promoter region
Indirect: Luciferase wt vs TF mutant
Indirect: Macroarrays: wt vs TF mutant
Indirect: MBP1:GFP nuclear fluorescence detection in a MBP1:GFP/ MBP1r strain vs WT
Indirect: mCherry fluorescence - Wild type vs N-terminus fluorescence tag fusion
Indirect: Microarray analysis - wt vs hyperactive TF
Indirect: Microarray analysis - wt vs TF chimera
Indirect: Microarray analysis - wt vs TF loss of function mutant
Indirect: Microarray analysis - wt vs TF mutant
Indirect: Microarray analysis - wt vs TF overexpression
Indirect: Microarray analysis hot1∆ and hot1∆/HOT1 strains
Indirect: Microarray analysis Wt versus Drph1
Indirect: Microarray analysis: WT vs FLO8 overexpression (1-g)
Indirect: Microarray analysis: WT vs FLO8 overexpression (µg)
Indirect: Microarray rph1-H235A vs. Wt
Indirect: Microarray TF mutant vs. Wt
Indirect: Microarray Wt vs. TF mutant
Indirect: Microarrays - Wild type Mcherry TF vs. TF deletion mutant
Indirect: Microarrays - Wild type vs TF mutant
Indirect: Microarrays - Wild type vs. TF deletion mutant
Indirect: Microarrays - wild type vs. TF ectopic induction
Indirect: Microarrays - Wild type vs. TF mutant
Indirect: Microarrays - Wild type vs. TF overexpression
Indirect: Microarrays hybridization - wt vs TF GOF mutant
Indirect: Miniarrays: wt vs TF mutant
Indirect: MOT3:GFP nuclear fluorescence detection in a MOT3:GFP/ MOT3r strain vs WT
Indirect: mRNA amplification - Wild-type vs TF deletion mutant
Indirect: mRNA decay assays - Wild type vs TF mutant
Indirect: Nanostring quantification of gene expression - wild type vs. TF mutant
Indirect: Net-seq
Indirect: Northern - wt vs binding site promoter mutant
Indirect: Northern - wt vs TF mutant
Indirect: Northern - wt vs. Mutant promoter region
Indirect: Northern - wt vs. TF gain-of-function mutant
Indirect: Northern - wt vs. TF mutant
indirect: Northern - WT vs. TF overexpression
Indirect: Northern Analysis: WT vs ∆upc2∆ecm22
Indirect: Northern blot - Wild type vs TF mutant
Indirect: Northern Blot - Wild-type vs. TF deletion mutant
Indirect: Northern blot - wt vs TF mutant
Indirect: Northern blot - wt vs TF overexpression
Indirect: Northern blot - wt. vs TF mutant
Indirect: Northern blot - wt. vs TF over-expression
Indirect: Northern blot - wt. vs TF overexpression
Indirect: Northern Blot for FLO11 - Wild-type vs. TF deletion mutant
Indirect: Northern Blot Wt vs. TF mutant
Indirect: Northern Blot: wt vs ∆aft1
Indirect: Northern Blot: wt vs ∆rim101
Indirect: Northern Blot: wt vs TF mutant
Indirect: Northern Bloting: ∆rim101 vs ∆rim101∆nrg1
Indirect: Northern Bloting: wt vs ∆crz1∆pho4∆rim101∆pho85 with overproduction of the Pho85–Pcl9 fusion protein
Indirect: Northern Bloting: wt vs ∆pho4∆pho85
Indirect: Northern Bloting: wt vs ∆rim101∆pho85
Indirect: Northern Bloting: wt vs ∆rpd3 with Pho4 overexpression
Indirect: Northern Bloting: wt vs ∆whi5 with rim101 overexpression
Indirect: Northern Blotting - wt vs TF mutant
Indirect: Northern blotting - Wild type vs mutated TF
Indirect: Northern blotting - Wild type vs TF mutant
Indirect: Northern blotting - Wild type vs Tfmutant overexpressing KDX1
Indirect: Northern blotting - Wild type vs. TF mutant
indirect: Northern Blotting - wt vs hyperactive TF
Indirect: Northern blotting - wt vs TF mutant
Indirect: Northern Tf mutant vs TF overexpressing mutant
Indirect: Northern vs TF overexpression
Indirect: Northern wt vs hyperactive TF
Indirect: Northern wt vs TF mutant
Indirect: Northern wt vs TF overexpression
Indirect: Northern wt vs TF overexpression mutant
Indirect: Overexpression of TF
Indirect: PAH1-lacZ reporter gene assay
Indirect: PolII ChIP-seq - wt vs. TF mutant
indirect: primer extension - WT vs. mutant promoter region
Indirect: Primer extension analysis - wt vs TF mutant
Indirect: Primer Extention - wt vs. TF mutant
Indirect: Protemics: wt vs TF mutant
indirect: Proteomics - TF mutant vs TF hyperactive mutant
Indirect: Proteomics - Wild type vs. TF mutant
indirect: Proteomics - wt vs TF mutant
Indirect: Proteomics - wt vs. TF mutant
Indirect: Proteomics: wt vs TF mutant
Indirect: Proteomics: wt vs TF overxpression
Indirect: Q-RTPCR: wt vs ∆fzf1
Indirect: Q-RTPCR: wt vs ∆yap7∆hap5
Indirect: Q-RTPCR: wt vs ∆yap7∆tup1
Indirect: qPCR: GFP-Yap8 vs GFP–Yap8-C132A/C274A (no effect on expression)
Indirect: qRT-PCR - Wild type vs GOF TF mutant
Indirect: qRT-PCR - Wild type vs TF GOF mutant
Indirect: qRT-PCR - Wild type vs TF mutant
Indirect: qRT-PCR - Wild type vs TFBS mutant
Indirect: qRT-PCR - Wild type vs. Prion form
Indirect: qRT-PCR - Wild type vs. TF binding site mutation
Indirect: qRT-PCR - Wild type vs. TF deletion mutant
Indirect: qRT-PCR - wild-type vs TF overexpression
Indirect: qRT-PCR Strain with Truncated Gat1 (pYX212-Gat1p1–375, S360A, S361A) Vs Wild-type
Indirect: qRT-PCR Wt versus TF mutant
Indirect: qRT-PCR: control vs GAT1 overexpression
Indirect: qRT-PCR: control vs GLN3 overexpression
Indirect: qRT-PCR: gdh1 Δ vs gdh1 Δ gat1 Δ
Indirect: qRT-PCR: gdh1 Δ vs gdh1 Δ gln3Δ
Indirect: qRT-PCR: proline medium vs proline medium supplemented with ammonium
Indirect: qRT-PCR: WT vs Ifh1 T681A-13Myc
Indirect: qRT-PCR: wt vs ∆gln3
Indirect: qRT-PCR: wt vs ∆yap1∆rck1
Indirect: qRT-PCR: wt vs ∆yap1∆yap2
Indirect: qRT-PCR: wt vs ∆yap2∆rck1
Indirect: qRT-PCR: wt vs ∆yap8∆ufd2
Indirect: qRT-PCR: WT vs gat1 Δ
Indirect: qRT-PCR: WT vs gln3 Δ
Indirect: qRT-PCR: WT vs Rim101 with W249L (gain-of-function)
Indirect: Quantigene Plex Assay - Wild type vs. TF mutant
Indirect: Quantitative Fluorescence Microscopy - Wild type vs TF mutant
Indirect: Quantitative Northern Blot: ∆pdr5 vs ∆pdr5∆gis1∆msn2∆msn4
Indirect: Quantitative Northern Blot: ∆pdr5 vs ∆pdr5∆rpn4
Indirect: Quantitative Northern Blot: ∆pdr5 vs ∆pdr5∆gis1 or ∆pdr5∆gis1∆msn2∆msn4
Indirect: Quantitative Northern Blot: ∆pdr5 vs ∆pdr5∆msn2∆msn4 or ∆pdr5∆gis1∆msn2∆msn4
Indirect: Quantitative Northern Blot: ∆pdr5 vs ∆pdr5∆gis1∆msn2∆msn4
Indirect: Quantitative Northern Blot: ∆pdr5 vs ∆pdr5∆msn2∆msn4 or ∆pdr5∆gis1∆msn2∆msn4
Indirect: Quantitative Northern Blot: ∆pdr5 vs ∆pdr5∆rpn4
Indirect: Quantitative Northern Blot: WT vs ∆asg1
Indirect: Quantitative Northern Blot: WT vs ∆flo8
Indirect: Quantitative Northern Blot: WT vs ∆mit1
Indirect: Quantitative Northern Blot: WT vs ∆mss11
Indirect: Quantitative Northern Blot: WT vs ∆rim101
Indirect: Quantitative Northern Blot: WT vs ∆tec1
Indirect: Quantitative Northern Blot: WT vs rtg1
Indirect: R-SGA - Wild type vs TF mutant
Indirect: real-time PCR: IFH1 wild-type and Ifh1- 7k-r mutant with carbon shift (higher expression with the mutated strain at the time point of 5 min)
Indirect: real-time RT-PCR: wt vs CUP9 overexpression
Indirect: RNA FISH: WT vs ∆flo8
Indirect: RNA FISH: wt vs ∆sfl1
Indirect: RNA-seq - ER stress vs TF ectopic expression (absence of ER stress)
Indirect: RNA-seq - Wild type vs TF mutant
Indirect: RNA-seq - Wild type vs. TF deletion mutant
Indirect: RNA-seq - wt vs TF mutant
Indirect: RNA-Seq - wt vs. TF mutant
Indirect: RNA-seq: S288c wt vs S288c(∑ RIM101)
Indirect: RNA-seq: wild-type vs TF mutant
Indirect: RNA-seq: WT vs ∆rim101
Indirect: RNA-seq: wt vs down-regulation of IFH1
indirect: RNAse protection assay - WT vs. TF overexpression
Indirect: RT-PCR - Wild type promoter vs mutated binding sites
Indirect: RT-PCR - Wild type vs complemented TF mutant
Indirect: RT-PCR - Wild type vs Damp TF
Indirect: RT-PCR - Wild type vs mutated TF
Indirect: RT-PCR - Wild type vs TF mutant
Indirect: RT-PCR - Wild type vs TF overexpression
Indirect: RT-PCR - Wild type vs. TF deletion mutant
Indirect: RT-PCR - Wild type vs. TF overexpression
Indirect: RT-PCR - wt vs binding site promoter mutant
Indirect: RT-PCR - wt vs TF GOF mutant
Indirect: RT-PCR - wt vs TF mutant
Indirect: RT-PCR - wt vs TF overexpression
Indirect: RT-PCR - wt vs TF repressed mutant
indirect: RT-PCR - WT vs. TF mutant
Indirect: RT-PCR - wt vs. TF overexpression
Indirect: RT-PCR - wt vs. Wt+hsf1 RNA aptamer
Indirect: RT-PCR ∆upc2∆ecm22 vs ∆upc2∆ecm22 with Upc2 with deletion of the ligand-binding domain
Indirect: RT-PCR Wt versus TF mutant
Indirect: RT-PCR Wt versus TF overexpressed
Indirect: RT-PCR wt vs TF domain mutation
Indirect: RT-PCR wt vs TF low expression mutant
Indirect: RT-PCR wt vs TF mutant
Indirect: RT-PCR wt vs TF overexpression
Indirect: RT-PCR: ∆gln3 vs ∆gln3 with GLN3S391D-Myc13
Indirect: RT-PCR: ∆stp1 vs ∆stp1∆hap4
Indirect: RT-PCR: ∆stp1 vs ∆stp1∆rtg1
Indirect: RT-PCR: control vs rapamycin
Indirect: RT-PCR: GAT1-HA3, HA3-(M40)GAT1-MYC13 or HA3-(M95)GAT1-MYC13 vs ∆gat1
Indirect: RT-PCR: Gln31 –730-Myc13 vs Gln3L332D,L336D,M340D,L343D-Myc13
Indirect: RT-PCR: WT vs ∆aro80
Indirect: RT-PCR: WT vs ∆flo8
Indirect: RT-PCR: WT vs ∆mss11
Indirect: RT-PCR: WT vs ∆rtg1
Indirect: RT-PCR: WT vs ∆sfl1
Indirect: RT-PCR: WT vs high copy of AFT1
Indirect: RT-PCR: wt vs TF mutant
Indirect: RT-PCR: wt vs TF over-expression
Indirect: RT-PCR: wt vs TF overexpression
Indirect: RT-PCR: WT vs UPC2 promoter mutant lacking TAAACGA sites
Indirect: RT-PCR:WT vs gat1Δ or gln3Δgat1Δ
Indirect: RT-PCR:WT vs gln3Δ or gln3Δgat1Δ
Indirect: RT-qPCR (Wt versus HSF1S608A mutant)
Indirect: RT-qPCR (Wt versus TF mutant)
Indirect: RT-qPCR (Wt vs. TF mutant)
Indirect: RT-qPCR hot1∆ and hot1∆/HOT1 strains
Indirect: RT-qPCR wt Gln3 vs Gain-of-function Gln3
Indirect: RT-qPCR Wt versus Dadr1 cat8
Indirect: RT-qPCR Wt versus TF mutant
Indirect: RT-qPCR Wt vs. SBF site mutants
Indirect: RT-qPCR Wt vs. TF overexpression (tet)
Indirect: RT-qPCR: WT with prp4-1 allele vs GAL1-IFH1 with prp4-1 allele
Indirect: RT-qPCR: ∆bdf1 vs ∆bdf1∆yap4
Indirect: S1 mapping - wt vs mutant promoter TF binding site
Indirect: S1 nuclease assay - wt vs TF mutant
Indirect: S1 nuclease assay - wt vs TF overexpression
Indirect: S1 nuclease assay - wt vs. TF mutant
Indirect: S1 nuclease assay wt vs TF mutant
Indirect: S1 nuclease assay wt vs TF overexpression
Indirect: S1 nuclease assay: wt vs TF mutant
Indirect: S1 nuclease assays wt vs Mutant promoter region
Indirect: S1 nuclease assays: wt vs TF mutant
Indirect: S1 nuclease assays: wt vs TF overexpression
Indirect: S1 nuclease protection assay - wt vs GOF TF mutant
Indirect: Slot blot hybridization - Wild type vs. TF mutant
Indirect: Slot blot hybridization - wt vs. TF mutant
Indirect: Time-lapse fluorescence microscopy: WT vs. TF binding site mutation
Indirect: Trx2-GFP: WT vs Δrtg3
indirect: Western - WT vs. TF mutant
Indirect: Western - wt vs. TF overexpression
Indirect: Western blot - Wild type vs TF mutant
Indirect: Western blot - Wild type vs. TF deletion mutant
Indirect: Western blot - Wild type vs. TF mutant
Indirect: Western blot - Wild type vs. TF OE (plasmid)
Indirect: Western Blot: ∆rim101 vs ∆rim101 with HSP82 overexpression
Indirect: Western Blot: ∆sok2 vs ∆sok2 with HSP82 overexpression
Indirect: Western Blot: ∆sum1 vs ∆sum1 with HSP82 overexpression
Indirect: Western Blot: Quantification of Ato1p-GFP in ∆rtg1 vs ∆rtg1∆mks1
Indirect: Western Blot: Quantification of Ato1p-GFP in ∆rtg3 vs ∆rtg3∆mks1
Indirect: Western Blot: wt vs CUP9 overexpression
Indirect: Western blot: wt vs TF mutant
Indirect: Western blotting - Wild type vs TF mutant
Indirect: Western blotting - Wild type vs TF overexpression
Indirect: Western blotting - Wild type vs. TF overexpression
Indirect: Western blotting - wt vs TF mutant
Indirect: Western blotting - wt vs. TF mutant
Indirect: Western wt vs TF mutant
Indirect: Western wt vs TF overexpression mutant
Undefined
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