Yeastract IST INESC-ID IBB-BSRG
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Transcription Factor Binding Site Reference(s)

The Yeastract team, is actively curating each transcriptor factor binding site evidence code and environmental condition.
Transcription
Factor		 Binding Site Source References Evidence
Code		 Environmental
Condition
Gzf3p GATAAG BSRG curated PubMed external link Coffman JA et al., J Bacteriol, 1997;179(11):3416-29Coffman JA et al., J Bacteriol, 1997;179(11):3416-29
PubMed external link Rowen DW et al., J Bacteriol, 1997;179(11):3761-6Rowen DW et al., J Bacteriol, 1997;179(11):3761-6
PubMed external link Soussi-Boudekou S et al., Mol Microbiol, 1997;23(6):1157-68Soussi-Boudekou S et al., Mol Microbiol, 1997;23(6):1157-68

Consensus sequences are
represented according to
the following IUPAC
frequency table:

IUPAC frequency table
A C G T
A 1 0 0 0
C 0 1 0 0
G 0 0 1 0
T 0 0 0 1
W1/2 0 0 1/2
S 0 1/21/2 0
R1/2 0 1/2 0
Y 0 1/2 0 1/2
M1/21/2 0 0
K 0 0 1/21/2
B 0 1/31/31/3
D1/3 0 1/31/3
H1/31/3 0 1/3
V1/31/31/3 0
N1/41/41/41/4
x1/41/41/41/4
a1/21/61/61/6
c1/61/21/61/6
g1/61/61/21/6
t1/61/61/61/2
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