Yeastract IST INESC-ID IBB-BSRG
Home > Go Back > View Contact Us     Tutorial     Help

 

Back to top top

Transcription Factor Binding Site Reference(s)

The Yeastract team, is actively curating each transcriptor factor binding site evidence code and environmental condition.
Transcription
Factor		 Binding Site Source References Evidence
Code		 Environmental
Condition
Ndt80p GNCRCAAAW BSRG curated PubMed external link Chu S et al., Mol Cell, 1998;1(5):685-96Chu S et al., Mol Cell, 1998;1(5):685-96
PubMed external link Hepworth SR et al., Mol Cell Biol, 1995;15(7):3934-44Hepworth SR et al., Mol Cell Biol, 1995;15(7):3934-44
PubMed external link Hepworth SR et al., Mol Cell Biol, 1998;18(10):5750-61Hepworth SR et al., Mol Cell Biol, 1998;18(10):5750-61
PubMed external link Ozsarac N et al., Mol Cell Biol, 1997;17(3):1152-9Ozsarac N et al., Mol Cell Biol, 1997;17(3):1152-9

Consensus sequences are
represented according to
the following IUPAC
frequency table:

IUPAC frequency table
A C G T
A 1 0 0 0
C 0 1 0 0
G 0 0 1 0
T 0 0 0 1
W1/2 0 0 1/2
S 0 1/21/2 0
R1/2 0 1/2 0
Y 0 1/2 0 1/2
M1/21/2 0 0
K 0 0 1/21/2
B 0 1/31/31/3
D1/3 0 1/31/3
H1/31/3 0 1/3
V1/31/31/3 0
N1/41/41/41/4
x1/41/41/41/4
a1/21/61/61/6
c1/61/21/61/6
g1/61/61/21/6
t1/61/61/61/2
w3c xhtml validator w3c css validator w3c xhtml+rdfa validator