Yeastract IST INESC-ID IBB-BSRG
Home > Go Back > View Contact Us     Tutorial     Help

 

Back to top top

Transcription Factor Binding Site Reference(s)

The Yeastract team, is actively curating each transcriptor factor binding site evidence code and environmental condition.
Transcription
Factor		 Binding Site Source References Evidence
Code		 Environmental
Condition
Pdr1p TCCGTGGA BSRG curated PubMed external link Katzmann DJ et al., J Biol Chem, 1996;271(38):23049-54Katzmann DJ et al., J Biol Chem, 1996;271(38):23049-54
PubMed external link Mahé Y et al., Mol Microbiol, 1996;20(1):109-17Mahé Y et al., Mol Microbiol, 1996;20(1):109-17
PubMed external link Mamnun YM et al., Mol Microbiol, 2002;46(5):1429-40Mamnun YM et al., Mol Microbiol, 2002;46(5):1429-40
PubMed external link Wolfger H et al., FEBS Lett, 1997;418(3):269-74Wolfger H et al., FEBS Lett, 1997;418(3):269-74

Consensus sequences are
represented according to
the following IUPAC
frequency table:

IUPAC frequency table
A C G T
A 1 0 0 0
C 0 1 0 0
G 0 0 1 0
T 0 0 0 1
W1/2 0 0 1/2
S 0 1/21/2 0
R1/2 0 1/2 0
Y 0 1/2 0 1/2
M1/21/2 0 0
K 0 0 1/21/2
B 0 1/31/31/3
D1/3 0 1/31/3
H1/31/3 0 1/3
V1/31/31/3 0
N1/41/41/41/4
x1/41/41/41/4
a1/21/61/61/6
c1/61/21/61/6
g1/61/61/21/6
t1/61/61/61/2
w3c xhtml validator w3c css validator w3c xhtml+rdfa validator