Yeastract IST INESC-ID IBB-BSRG
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Transcription Factor Binding Site Reference(s)

The Yeastract team, is actively curating each transcriptor factor binding site evidence code and environmental condition.
Transcription
Factor
Binding Site Source References Evidence
Code
Environmental
Condition
Pho4p cACGTGt PBM/MITOMI PubMed external link Fordyce PM et al., Nat Biotechnol, 2010;28(9):970-5Fordyce PM et al., Nat Biotechnol, 2010;28(9):970-5 MITOMI

Consensus sequences are
represented according to
the following IUPAC
frequency table:

IUPAC frequency table
A C G T
A 1 0 0 0
C 0 1 0 0
G 0 0 1 0
T 0 0 0 1
W1/2 0 0 1/2
S 0 1/21/2 0
R1/2 0 1/2 0
Y 0 1/2 0 1/2
M1/21/2 0 0
K 0 0 1/21/2
B 0 1/31/31/3
D1/3 0 1/31/3
H1/31/3 0 1/3
V1/31/31/3 0
N1/41/41/41/4
x1/41/41/41/4
a1/21/61/61/6
c1/61/21/61/6
g1/61/61/21/6
t1/61/61/61/2
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