Yeastract IST IBB-BSRG INESC-ID
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Transcription Factor Binding Site Reference(s)

The Yeastract team, is actively curating each transcriptor factor binding site evidence code and environmental condition.
Transcription
Factor
Binding Site Source References Evidence
Code
Environmental
Condition
Sko1p TGACGTCA BSRG curated PubMed external link Gordân R et al., Genome Biol, 2011;12(12):R125Gordân R et al., Genome Biol, 2011;12(12):R125 PBM
PubMed external link Spode I et al., J Mol Biol, 2002;319(2):407-20Spode I et al., J Mol Biol, 2002;319(2):407-20

Consensus sequences are
represented according to
the following IUPAC
frequency table:

IUPAC frequency table
A C G T
A 1 0 0 0
C 0 1 0 0
G 0 0 1 0
T 0 0 0 1
W1/2 0 0 1/2
S 0 1/21/2 0
R1/2 0 1/2 0
Y 0 1/2 0 1/2
M1/21/2 0 0
K 0 0 1/21/2
B 0 1/31/31/3
D1/3 0 1/31/3
H1/31/3 0 1/3
V1/31/31/3 0
N1/41/41/41/4
x1/41/41/41/4
a1/21/61/61/6
c1/61/21/61/6
g1/61/61/21/6
t1/61/61/61/2
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