Yeastract IST IBB-BSRG INESC-ID
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Transcription Factor Binding Site Reference(s)

The Yeastract team, is actively curating each transcriptor factor binding site evidence code and environmental condition.
Transcription
Factor
Binding Site Source References Evidence
Code
Environmental
Condition
Yap1p TTACTCA BSRG curated PubMed external link Fernandes L et al., Mol Cell Biol, 1997;17(12):6982-93Fernandes L et al., Mol Cell Biol, 1997;17(12):6982-93 Direct: EMSA
PubMed external link Natkańska U et al., Biochim Biophys Acta, 2017;1864(1):39-50Natkańska U et al., Biochim Biophys Acta, 2017;1864(1):39-50 Indirect: B-galactosidase assay: wt vs mutation in HSP31 promoter TTACTCA binding motif to yap1 Post-diauxic cells (1.2 108 cells ml ?1). gene fusion of the HSP31 promoter region up to ? 453 bp with a lacZ reporter gene

Consensus sequences are
represented according to
the following IUPAC
frequency table:

IUPAC frequency table
A C G T
A 1 0 0 0
C 0 1 0 0
G 0 0 1 0
T 0 0 0 1
W1/2 0 0 1/2
S 0 1/21/2 0
R1/2 0 1/2 0
Y 0 1/2 0 1/2
M1/21/2 0 0
K 0 0 1/21/2
B 0 1/31/31/3
D1/3 0 1/31/3
H1/31/3 0 1/3
V1/31/31/3 0
N1/41/41/41/4
x1/41/41/41/4
a1/21/61/61/6
c1/61/21/61/6
g1/61/61/21/6
t1/61/61/61/2
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