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Modelling prediction
Essentiality
[metab] Optimisation
manipulating gene expression
manipulating TF expression
Cross species
Promoter analysis
Homologous network
Network comparison
Rank by Unique TFBS
Rank genes
Rank by TF
Rank by GO
Regulatory Associations
Search for TFs
Search for Genes
Search for Associations
Pattern Matching
Search by DNA Motif
Find TF Binding Site(s)
Utilities
Search for Orthologs
IUPAC Code Generation
ORF List ⇔ Gene List
Retrieve
TF-Consensus List
Regulation Matrix
Upstream Sequence
About
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Gene Ontology Term Information
Ontology
Molecular function
GO ID
GO:0003677
GO term
level 5: DNA binding
Parent terms
level 4:
nucleic acid binding
Children terms
level 6:
DNA secondary structure binding
level 3:
DNA template activity
level 6:
bent DNA binding
level 6:
damaged DNA binding
level 6:
double-stranded DNA binding
level 6:
single-stranded DNA binding
level 6:
DNA binding, bending
level 6:
recombination hotspot binding
level 4:
chromatin DNA binding
level 6:
sequence-specific DNA binding
level 6:
DNA end binding
level 6:
triplex DNA binding
level 6:
G-quadruplex DNA binding
level 6:
flap-structured DNA binding
level 6:
histone-dependent DNA binding
Associated ORF/genes
YBR089C-A/NHP6B
YBR098W/MMS4
YBR114W/RAD16
YBR123C/TFC1
YBR150C/TBS1
YBR154C/RPB5
YBR163W/EXO5
YBR182C/SMP1
YBR193C/MED8
YBR202W/MCM7
YBR215W/HPC2
YBR239C/ERT1
YBR240C/THI2
YBR245C/ISW1
YBR297W/MAL33
YCL067C/HMLALPHA2
YCL066W/HMLALPHA1
YCL011C/GBP2
YCR014C/POL4
YCR018C/SRD1
YCR028C-A/RIM1
YCR033W/SNT1
YCR039C/MATALPHA2
YCR040W/MATALPHA1
YCR065W/HCM1
YCR066W/RAD18
YCR087C-A
YCR092C/MSH3
YCR096C/HMRA2
YCR097W/HMRA1
YCR106W/RDS1
YDL227C/HO
YDL220C/CDC13
YDL200C/MGT1
YDL185W/VMA1
YDL170W/UGA3
YDL164C/CDC9
YDL156W/CMR1
YDL154W/MSH5
YDL150W/RPC53
YDL140C/RPO21
YDL106C/PHO2
YDL102W/POL3
YDL056W/MBP1
YDL020C/RPN4
YDL002C/NHP10
YDR004W/RAD57
YDR026C/NSI1
YDR034C/LYS14
YDR043C/NRG1
YDR052C/DBF4
YDR076W/RAD55
YDR081C/PDC2
YDR096W/GIS1
YDR097C/MSH6
YDR110W/FOB1
YDR123C/INO2
YDR145W/TAF12
YDR146C/SWI5
YDR174W/HMO1
YDR207C/UME6
YDR213W/UPC2
YDR216W/ADR1
YDR224C/HTB1
YDR225W/HTA1
YDR227W/SIR4
YDR253C/MET32
YDR259C/YAP6
YDR263C/DIN7
YDR289C/RTT103
YDR291W/HRQ1
YDR295C/HDA2
YDR296W/MHR1
YDR303C/RSC3
YDR310C/SUM1
YDR314C/RAD34
YDR328C/SKP1
YDR332W/IRC3
YDR334W/SWR1
YDR362C/TFC6
YDR369C/XRS2
YDR386W/MUS81
YDR419W/RAD30
YDR421W/ARO80
YDR423C/CAD1
YDR440W/DOT1
YDR451C/YHP1
YDR463W/STP1
YDR520C/URC2
YEL055C/POL5
YEL032W/MCM3
YEL009C/GCN4
YEL007W/MIT1
YER028C/MIG3
YER040W/GLN3
YER045C/ACA1
YER064C/VHR2
YER088C/DOT6
YER095W/RAD51
YER105C/NUP157
YER111C/SWI4
YER130C/COM2
YER148W/SPT15
YER161C/SPT2
YER162C/RAD4
YER164W/CHD1
YER169W/RPH1
YER171W/RAD3
YER176W/ECM32
YER179W/DMC1
YER184C/TOG1
YFL052W/ZNF1
YFL036W/RPO41
YFL031W/HAC1
YFL021W/GAT1
YFL008W/SMC1
YFL003C/MSH4
YFR013W/IOC3
YFR034C/PHO4
YFR037C/RSC8
YFR038W/IRC5
YGL254W/FZF1
YGL251C/HFM1
YGL249W/ZIP2
YGL244W/RTF1
YGL237C/HAP2
YGL209W/MIG2
YGL201C/MCM6
YGL183C/MND1
YGL175C/SAE2
YGL169W/SUA5
YGL166W/CUP2
YGL163C/RAD54
YGL150C/INO80
YGL096W/TOS8
YGL073W/HSF1
YGL043W/DST1
YGL035C/MIG1
YGL033W/HOP2
YGL013C/PDR1
YGR005C/TFG2
YGR044C/RME1
YGR047C/TFC4
YGR067C
YGR071C/ENV11
YGR099W/TEL2
YGR116W/SPT6
YGR140W/CBF2
YGR159C/NSR1
YGR186W/TFG1
YGR229C/SMI1
YGR246C/BRF1
YGR249W/MGA1
YGR258C/RAD2
YGR285C/ZUO1
YGR288W/MAL13
YHL027W/RIM101
YHL022C/SPO11
YHL020C/OPI1
YHL009C/YAP3
YHR006W/STP2
YHR031C/RRM3
YHR056C/RSC30
YHR081W/LRP1
YHR084W/STE12
YHR118C/ORC6
YHR120W/MSH1
YHR124W/NDT80
YHR143W-A/RPC10
YHR146W/CRP1
YHR164C/DNA2
YHR177W/ROF1
YHR178W/STB5
YHR191C/CTF8
YHR206W/SKN7
YIL143C/SSL2
YIL131C/FKH1
YIL130W/ASG1
YIL126W/STH1
YIL119C/RPI1
YIL101C/XBP1
YIL072W/HOP1
YIL056W/VHR1
YIL036W/CST6
YIL021W/RPB3
YIR002C/MPH1
YIR013C/GAT4
YIR017C/MET28
YIR018W/YAP5
YIR023W/DAL81
YJL206C
YJL176C/SWI3
YJL173C/RFA3
YJL110C/GZF3
YJL103C/GSM1
YJL025W/RRN7
YJR006W/POL31
YJR035W/RAD26
YJR046W/TAH11
YJR060W/CBF1
YJR068W/RFC2
YJR127C/RSF2
YJR140C/HIR3
YJR144W/MGM101
YJR147W/HMS2
YKL222C
YKL214C/YRA2
YKL185W/ASH1
YKL144C/RPC25
YKL114C/APN1
YKL113C/RAD27
YKL112W/ABF1
YKL109W/HAP4
YKL089W/MIF2
YKL082C/RRP14
YKL062W/MSN4
YKL054C/DEF1
YKL049C/CSE4
YKL045W/PRI2
YKL043W/PHD1
YKL038W/RGT1
YKL032C/IXR1
YKL017C/HCS1
YKL015W/PUT3
YKR034W/DAL80
YKR048C/NAP1
YKR062W/TFA2
YKR064W/OAF3
YKR099W/BAS1
YLL054C
YLL004W/ORC3
YLR013W/GAT3
YLR014C/PPR1
YLR032W/RAD5
YLR095C/IOC2
YLR098C/CHA4
YLR131C/ACE2
YLR150W/STM1
YLR175W/CBF5
YLR176C/RFX1
YLR182W/SWI6
YLR228C/ECM22
YLR233C/EST1
YLR234W/TOP3
YLR256W/HAP1
YLR266C/PDR8
YLR274W/MCM5
YLR278C
YLR288C/MEC3
YLR318W/EST2
YLR323C/CWC24
YLR373C/VID22
YLR398C/SKI2
YLR403W/SFP1
YLR442C/SIR3
YLR451W/LEU3
YML127W/RSC9
YML113W/DAT1
YML099C/ARG81
YML095C/RAD10
YML081W/TDA9
YML076C/WAR1
YML069W/POB3
YML065W/ORC1
YML061C/PIF1
YML051W/GAL80
YML027W/YOX1
YML010W/SPT5
YML007W/YAP1
YMR005W/TAF4
YMR016C/SOK2
YMR019W/STB4
YMR021C/MAC1
YMR037C/MSN2
YMR039C/SUB1
YMR042W/ARG80
YMR043W/MCM1
YMR044W/IOC4
YMR048W/CSM3
YMR072W/ABF2
YMR074C/SDD2
YMR078C/CTF18
YMR094W/CTF13
YMR106C/YKU80
YMR111C/EUC1
YMR114C
YMR136W/GAT2
YMR137C/PSO2
YMR168C/CEP3
YMR176W/ECM5
YMR182C/RGM1
YMR201C/RAD14
YMR213W/CEF1
YMR228W/MTF1
YMR241W/YHM2
YMR280C/CAT8
YMR284W/YKU70
YNL312W/RFA2
YNL290W/RFC3
YNL273W/TOF1
YNL262W/POL2
YNL248C/RPA49
YNL239W/LAP3
YNL218W/MGS1
YNL216W/RAP1
YNL215W/IES2
YNL206C/RTT106
YNL167C/SKO1
YNL151C/RPC31
YNL113W/RPC19
YNL103W/MET4
YNL102W/POL1
YNL088W/TOP2
YNL068C/FKH2
YNL031C/HHT2
YNL030W/HHF2
YNL027W/CRZ1
YNL007C/SIS1
YNR063W/PUL4
YOL145C/CTR9
YOL116W/MSN1
YOL108C/INO4
YOL095C/HMI1
YOL094C/RFC4
YOL090W/MSH2
YOL089C/HAL9
YOL086W-A/MHF1
YOL067C/RTG1
YOL043C/NTG2
YOL028C/YAP7
YOL012C/HTZ1
YOL006C/TOP1
YOL005C/RPB11
YOR005C/DNL4
YOR014W/RTS1
YOR028C/CIN5
YOR032C/HMS1
YOR033C/EXO1
YOR038C/HIR2
YOR077W/RTS2
YOR110W/TFC7
YOR113W/AZF1
YOR116C/RPO31
YOR140W/SFL1
YOR144C/ELG1
YOR151C/RPB2
YOR162C/YRR1
YOR172W/YRM1
YOR207C/RET1
YOR210W/RPB10
YOR217W/RFC1
YOR224C/RPB8
YOR258W/HNT3
YOR290C/SNF2
YOR298C-A/MBF1
YOR304W/ISW2
YOR330C/MIP1
YOR337W/TEA1
YOR341W/RPA190
YOR344C/TYE7
YOR346W/REV1
YOR358W/HAP5
YOR363C/PIP2
YOR368W/RAD17
YOR380W/RDR1
YOR386W/PHR1
YPL248C/GAL4
YPL230W/USV1
YPL194W/DDC1
YPL177C/CUP9
YPL167C/REV3
YPL133C/RDS2
YPL128C/TBF1
YPL127C/HHO1
YPL089C/RLM1
YPL082C/MOT1
YPL075W/GCR1
YPL038W/MET31
YPL024W/RMI1
YPL022W/RAD1
YPL016W/SWI1
YPL008W/CHL1
YPL007C/TFC8
YPR008W/HAA1
YPR010C/RPA135
YPR013C/CMR3
YPR019W/MCM4
YPR022C/SDD4
YPR052C/NHP6A
YPR065W/ROX1
YPR104C/FHL1
YPR110C/RPC40
YPR162C/ORC4
YPR175W/DPB2
YPR179C/HDA3
YPR186C/PZF1
YPR187W/RPO26
YPR190C/RPC82
YPR196W
YPR199C/ARR1
YAL051W/OAF1
YAL019W/FUN30
YAL015C/NTG1
YAL001C/TFC3
YAR007C/RFA1
YBL103C/RTG3
YBL066C/SEF1
YBL054W/TOD6
YBL035C/POL12
YBL023C/MCM2
YBL022C/PIM1
YBL021C/HAP3
YBL019W/APN2
YBL010C/LAA2
YBL008W/HIR1
YBL005W/PDR3
YBL003C/HTA2
YBL002W/HTB2
YBR009C/HHF1
YBR010W/HHT1
YBR026C/ETR1
YBR033W/EDS1
YBR049C/REB1
YBR066C/NRG2
YBR073W/RDH54
YBR083W/TEC1
YBR087W/RFC5
YBR088C/POL30
YJL092W/SRS2
YJL089W/SIP4
YJL056C/ZAP1
YAR009C
YCL019W
YDR034C-D
YDL160C-A/MHF2
YBL005W-B
YDR098C-B
YDR316W-B
YDR365W-B
YER160C
YER138C
YFL002W-A
YGR161C-D
YGR027W-B
YGR038C-B
YGR109W-B
YGR109W-A
R0010W/FLP1
YHL009W-B
YIL082W-A
YJR027W
YJL113W
YLR157C-B
YLR035C-A
YLR227W-B
YML045W
YML039W
YMR045C
YNL284C-B
YOL103W-B
YOR142W-B
YOR343W-B
YPL257W-B
YPR158C-D
YPL060C-A
YPR137C-B
YBR012W-B
YDR210C-D
YDR210W-B
YDR261C-D
YDR261W-B
YGR161W-B
YHR214C-B
YJR029W
YLR410W-B
YMR050C
YNL054W-B
YOR192C-B
YPR158W-B
YBL100W-B
PCNA homotrimer/CPX-544
CTF18-RFC complex/CPX-1731
TREX complex/CPX-1793