Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
NUP42
Systematic Name
YDR192C
Alias
RIP1, UIP1
Strain
S288c
Description
FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) cytoplasmic filaments; contributes directly to nucleocytoplasmic transport and maintenance of the NPC permeability barrier and is involved in gene tethering at the nuclear periphery; interacts with Gle1p; human homolog NUP42 can complement yeast mutant
External sources
Open in SGD
Open in KEGG
Gene Sequence
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>NUP42 YDR192C
ATGTCAGCTTTCGGTAACCCATTCACGTCGGGTGCTAAGCCTAATCTTTCTAATACAAGT
GGTATCAACCCTTTCACAAATAATGCTGCTAGTACCAATAACATGGGAGGAAGTGCATTT
GGAAGACCTAGTTTTGGAACAGCAAACACAATGACAGGAGGAACCACCACTTCAGCATTT
GGAATGCCCCAGTTTGGTACCAATACAGGCAATACTGGCAATACGTCAATTAGCGCTTTT
GGGAACACCAGTAATGCGGCTAAACCGTCAGCATTTGGAGCACCAGCATTTGGTTCTAGC
GCCCCCATCAATGTTAATCCGCCTTCTACTACGTCAGCATTTGGAGCACCGTCATTTGGA
TCAACAGGTTTTGGTGCTATGGCGGCGACAAGTAATCCTTTTGGTAAAAGTCCTGGCTCA
ATGGGCTCTGCATTTGGTCAACCAGCTTTTGGAGCGAACAAAACTGCTATCCCTTCTAGT
TCGGTTAGTAATAGTAATAACTCCGCATTTGGTGCTGCGTCAAACACGCCCTTGACCACA
ACTTCTCCTTTTGGTTCACTGCAACAAAACGCATCACAAAATGCATCATCTACATCGTCA
GCGTTTGGCAAACCGACTTTCGGCGCAGCTACTAATACCCAGTCGCCATTTGGTACTATT
CAAAATACAAGTACAAGCAGTGGGACAGGAGTATCCCCATTTGGCACATTTGGAACTAAT
AGTAATAACAAATCACCTTTTAGTAATCTACAGAGCGGAGCAGGCGCTGGTTCTTCGCCG
TTTGGTACTACAACCTCCAAAGCTAACAACAACAATAACGTGGGCAGTAGCGCATTCGGA
ACGACGAATAATCAATCTCCTTTTAGCGGAGGTTCTGGGGGCACCTTTGGTTCTGCTTCT
AACCTCAATAAAAATACCAATGGCAACTTTCAATCTTCTTTTGGTAATAAAGGGTTTTCA
TTCGGAATTACACCACAAAACGATGCCAACAAAGTCTCGCAATCGAACCCTTCATTTGGG
CAAACAATGCCAAACACAGATCCGAACATAAGTTTGAAGAGCAATGGTAACGCAACCTCT
TTTGGATTTGGACAACAACAGATGAATGCTACTAATGTCAACGCTAATACGGCCACCGGA
AAAATTAGATTTGTTCAAGGGTTATCTTCTGAAAAGGACGGTATTCTAGAATTGGCCGAT
CTCGCAGAGGAAACACTGAAAATATTCAGAGCAAACAAGTTTGAACTAGGCCTTGTCCCT
GATATACCTCCACCACCTGCATTGGTTGCATAG
Promoter Sequence
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>NUP42 YDR192C
ATTCAATACTTTCACGTGTAAATACCTAGTATATAAATATTAAACAAAAATTTTTTTTCT
TCTCCTATTCTCTTAAAATGATAACTATACGAAGATCCTACTGGTATATTTATTCGTCAA
TGCTTATTTACGACCGGTACCTCCATTCTTACTTTCGCTCTTCCTCCTCTCAAAGGAAAA
GTAATTCTAACATTGTAATTCTTATTTAAACGGATGGAAGAAAGCTTTTGAGAATTTACT
TGAAAAGTCAGGGTGTCTTAGGCGATTGATCACGGACATAGCCATATTACGAAAACTTCA
TTCTGAATATTGCCAACGAGACAATCGTGGGCTTGGTAATCGTTGAAAAATTTTCACATA
TTTTATGAACAGCTGAGCCTATTAACAATGAAAATAGTCTATACGATAGTCCAGAACTGA
ATAACAGTGTCAATCACTTTTTTTTTTATGATTAAATCCTAGTTAAAGTGCCGCTCTGCG
AAAGAAAAATCAATAAATACCATTTGTTAGTGATCTAGCAATAATATCAATGACATCTTG
TCTTATCTTAAAAATAAACAAAAAATTCTTTACAGTGTACTGAGCATTAATCTGGCTACG
GCCTGGAGGGAAATTATGTCTTATACGAATTTTGCTCCGGCAATTCTATTTACGCTGTTT
AGCTTATCATGCGATTTCAACCTTCTTTATATAGTAAATTAGCTTCGAAATAAAAGTATT
CGCGAGAGGACAAGACATGAAACCTAAACCACGACGCTGAAGGTAACGACATCATAATAC
GTTTCAAAGGGCTAACCTTAATATACTGACATCTAGAAATATATTAATTCTGCATATCAA
GAAACACGCCGACTGAGGGTGCAAGGTATTTGAAAAAAAATAGTGAATCAATAGATGAGC
GCACAATGTTTAAAGTACTATAACACTGAACTGTTGTACTTTAACGCAAAAGCTCATCAA
GCTATCATTAAATTTCGACCCGAGCAACGACTCAACTGTA
Chr coordinates
Chr IV from 844861-843569