Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
SYF1 Systematic Name
YDR416W Alias
NTC90 Strain
S288c Description
Member of the NineTeen Complex (NTC); that contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; null mutant has splicing defect and arrests in G2/M; relocalizes to the cytosol in response to hypoxia; homologs in human and C. elegans External sources
Open in SGD
Open in KEGG
Gene Sequence
Download FASTA Hide Seq
>SYF1 YDR416W
ATGTCAGCATACATCGCAATGAAAGGAGTAATAACAAACGTCGATGAGAACATAAGAAAT
GATGAAGATGTGGCTTTTGAGTACGAAATACAAAAGACACCGCAGAACATACTTACATGG
AAAAGATATATCGAGTATTGGAAAGAGGAGGGAAGAACTGACAAACAGATTAGGTGGCTA
TATGAAAGATTTTGTTCACAATTTGTAACAGATACAAGTATATGGGAAGATTATATACGC
TGGGAATCAACAAAGGAAGTAGTCGAAACTTCACGTATTTTCTGGCTTTTTCAAAGGTGC
CTGAAAAGCTGTGTACGAGATTGTGACAGGATATGTTTGTCTTATTTAGAATTGGCAATT
GAACAATATGACTTGGCAATGATAAGGCATGCCTTAGCTTCATCTTTAATGAAAATGGAG
AGAGAAATGCATCGGAAAGTTTGGGATCCTGTCATAAAATTTGTGGAAGAAAAAGTTTTA
CCATTAACGCAACTGGATTCAACTCAAGAAGATGAAGAAGAAAGTACTGATGAAGCTGAA
TTGATAAATGTACTTTTAGTGAAGGGTTTCACGAAGGGAGGTTTTATTAGCGAGGAAATT
AGTGAAAACGGAAGTAGAGGTGATATTTGGTCGTCACATATTTTAGAAAGATACTTAAAA
GTGGCTCCTCAGCAAAAACGAAATGAATCGCTGGCAACTCTTGCATTAACTAGAGACAAT
ATTACCATCAAATCAGTATATGAAAAGTATTTGCCACAAGATGAAAATAGTGGGAAGTAT
CTACCTAGTTCAGAACTGCCTTTTGAATTAAATTTCAATTATTTGGCCAGCCTAGAAAAA
CTAGGTTTAGATAATCAATATGAGGAGTTCATGAGGCAAATGAATGGCATATATCCCGAC
AAATGGCTTTTTTTGATCCTATCACTTGCCAAATATTATATCTCTCGCGGGAGGCTTGAC
AGTTGTGGTGATTTATTGAAGAAAAGTTTACAGCAAACACTTAGGTACAGTGATTTTGAT
CGCATCTATAATTTCTATTTGCTATTTGAGCAAGAGTGCTCCCAATTTATTCTGGGAAAG
CTAAAGGAAAATGACAGCAAATTCTTTAATCAAAAAGATTGGACTGAAAAGTTACAAGCT
CATATGGCGACATTTGAATCTTTAATCAACTTATATGATATCTATTTGAACGATGTCGCA
CTAAGGCAAGATTCCAACTTGGTGGAAACGTGGATGAAAAGAGTGTCCTTGCAGAAGTCA
GCAGCGGAAAAGTGTAATGTGTATTCAGAAGCTATACTGAAAATTGATCCCCGAAAAGTT
GGTACGCCTGGCTCTTTCGGTAGGCTTTGGTGTTCGTATGGGGATTTGTATTGGAGATCA
AACGCAATTAGTACAGCTAGAGAATTGTGGACACAATCTCTGAAGGTACCGTATCCTTAT
ATAGAAGATCTGGAAGAAATTTACCTAAACTGGGCTGATAGAGAATTAGATAAAGAAGGG
GTGGAAAGAGCTTTTTCTATCCTTGAAGATGCATTACATGTGCCAACAAATCCAGAAATT
CTCCTCGAAAAATATAAGAATGGACACAGAAAAATACCTGCTCAAACTGTTCTATTCAAC
TCATTACGTATTTGGTCCAAATACATTGATTATCTAGAGGCTTACTGCCCAAAGGATGCA
AATTCCTCCGATAAAATATTCAATAAGACAAAAATGGCATACAATACTGTTATTGATTTG
AGATTGATCACTCCAGCAATGGCAGAAAATTTTGCATTGTTCTTACAAAATCATTACGAA
GTCATGGAAAGTTTTCAGGTGTATGAGAAAACAATCCCTCTGTTTCCCCCCGAAATCCAA
TACGAATTATGGATTGAGTATCTAGAAGTAGCGACATCACATCAATTGTCATCACTGAGT
CCTGAACATATTAGATTTTTGTTTGAGAAAGCACTTAAGAATCTATGTTCAAATGGTATA
GACTGTAAAACAATTTTTATCGCTTATAGCGTATTTGAAGAAAGGATAAGTGGTCTGATT
AGCAAGAGTATTGAGATATTACGTAGAGGTGCTGTAATAGGTACTGTTAGTGTGAGCACG
CACCTCGAAAGTAGACTGCAACTGTGGAGAATGTGTATTTCCAAGGCCGAGTCTACTTTG
GGACCATCAGTAACCAGAGAGTTGTACCAAGAATGCATTCAAATTTTACCAAACTCTAAA
GCTGTTGAGTTTGTGATTAAATTTTCAGATTTCGAGAGCTCTATAGGAGAAACTATTCGA
GCACGTGAAATCCTTGCCTATGGTGCAAAGCTTCTTCCTCCATCCAGAAATACTGAATTA
TGGGATAGCTTTGAAATTTTTGAGTTAAAACATGGGGATAAGGAAACTTACAAAGACATG
TTGAAGATGAAGAAGGTGTTGGAATCCAACATGCTCATTGATTCAGCTAGCGTTAGCCAT
GAGGAAGGTAACATTAACTTCGTGGCGGCAGCAACCTCGCATGCTCCCAACTCGCATACT
CTTACCCAATCAACCTCTTCATATTCGATTAATCCAGATGAAATAGAACTAGATATTTGA Promoter Sequence
Download FASTA
>SYF1 YDR416W
CATCAAGAGAACCCAACAATCCCCCCTCTTCGGCGGAATAAAAGTGAAATTCCACAGTGT
TGTTAGGTCTAAATCCTCTCTTCAAAAAATTTTCCGTATATAATCTGAGAGCCTCCATAT
TAGTCACCGTGCCTGACCCATTGTCGTCCGCACCTGGAGCTGCCATTATGGATGGCAGTA
GCAGATTGATAGAATCTTGATGAGAACCAATTATTATAATATCTTCTGGCGTAGTAGATC
CCGTGACACGGACTATAATTGAATATTGCTTCCATTCTTTGTGATCAAAATGTTCAATAG
TCAACGTATCTTGCGGAATATCTTTTGTAATATTAGCGATAGTTGCAGCTAACCACTCGG
CAGATTCAAAGCCGTGATCGGACTTGTAGTAACGGGTGTAAAAACTTGTAAACTTTGCCA
AGTTCTTGTGCATAGAGCCCTTGTCTATATTCTTAATCGAATCATCCACTACTTCTTTGT
TCGATATCTCAGGAGGATAGTTATACGTTGGTACTGTTGGCTCTTCCTCCTTGTTAAAGA
AAGGTAAGAAAGAAGTGTGTTTGGTCACATCAAAGAATTTGACACCTCTTCTTCGTAAGT
TTAGCTTTTCTGATTCGGGAACCTCCATTACCTCATTCTCTCCTACTTGTAAAACCCTTA
AAGGCTCATATGGATATGACCATGCGATGATGGCAACATTAAATAAAACAAAAAGCGACT
GTATCCTCATATTGTGCTAATCAGCGGTTGATTATGTTACTTACTTTTTCGAATAAAGAT
TTTGTATTTCTTTAGCTTCGAAGATTGATAATTATTGAATATCAAGTTTCAGTTTACTAT
AGCGGTCCGAACATATGAAAGATTTTAGTAAAGACGCTGGCAAGCTTTTCAGTCAAAATA
ATACAAAAGGAAATAGATAGAAAAAAAGGAAATAATCAGGCCTCCATATTGGACTCAACT
ATCCTTCAGTACCGCAAAACTTATTGTGTCCATATATCCT
Chr coordinates
Chr IV from 1298432-1301011
