S.cerevisiae - Yeastract

Locus Information

Standard Name	TPA1
Systematic Name	YER049W
Strain	S288c
Description	Prolyl hydroxylase; catalyzes oxygen-dependent dihydroxylation of Rps23a/b, a 40S ribosomal decoding center subunit; influences translational termination and regulates translational accuracy; interacts with Sup45p (eRF1), Sup35p (eRF3) and Pab1p; disputed role as a oxidative dealkylase repairing DNA methyl-base lesions; poly(rA)-binding protein affecting poly(A) tail length and mRNA stability; Fe(II)/2-oxoglutarate-dependent dioxygenase family member similar to human prolyl 4-hydroxylase OGFOD1
External sources	Open in SGD Open in KEGG

Gene Sequence Download FASTA View Seq	Sequence hidden
Promoter Sequence Download FASTA	>TPA1 YER049W TTACAGCTCCAACAAGAAGGCAGGTGTTGTCTTTATACAAGGAATTCATCAAGAATGCTA ATCAATTCAATAATTACAACTTCAGGGAATACTTTTTAAGTAAAACAAGGACTACTTTCA GAAAGAACATGAATCAGCAAGACCCAAAAGTGTTAATGAACCTATTTAAGGAAGCTAAGA ACGACTTAGGTGTCTTGAAAAGACAGTCTGTTATTTCTCAGATGTACACATTTGACAGGC TGGTCGTAGAACCATTGCAAGGAAGAAAACACTAAAACCTGGCCTAACTGGTCATTGCAT GTAAGAAAGAACTTTCCAGTAATTTTTTCCTTCTCACGTCAGGAAATTCGTATGGTTATA TCTTATAGAGAGGTGGCCGCCTTTAATTTGGAAAAGATATTATTAGATGATATTCCTAAT TTTCGACCGATACTTTGCATGGTTGGACTTCAATTAGATCATGTAATTTACTTCCTTAAT ATCAATAGCATTTCTTTTTTGGTAGAAGATTTTTCTTTTCTTTTCTTTTCTTCAACCCAC ATGGGACTATAAGAGGAGAGTTTATAGCTTGTATATAAAACGCTATAACTAAAACATAAG CCCACTCTGAGGTGAGATGTCTTTACGGTATGATAACAAGCTGATGCAATGAGAGATCCT ATGAATTGCTTGGATTCTTTTACATCAGGCATAAAGTTTCCGAAGTATGCAATAAAATGA GTATTTGCTTATTTATTGTTTGTATCGGGCGATCTTACACCTACTTTATGTGCGTAATAG TTGCATCTTCTTTTTTCGGACCATTCCATCGGATAAACTTCTTAGGTAAAAGTGAAAAAA AAAAAAAATTCGCTTATATATTAATCAAGTCATCACTTGGAAGCCGTTCTCTTCCGTTTA CAACACGAAGAGCCAACTGTTTTCTTGTGTCATTCTTTAGCACTCTTTCTTTTTATTTTT ACATTTTTTAATTAAGATCACCAAATATACCGGGAATATA
Chr coordinates	Chr V from 251728-253662