Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
RAT1 Systematic Name
YOR048C Alias
HKE1, TAP1, XRN2 Strain
S288c Description
Nuclear 5' to 3' single-stranded RNA exonuclease; involved in RNA metabolism, including rRNA and snoRNA processing, as well as poly (A+) dependent and independent mRNA transcription termination; required for cotranscriptional pre-rRNA cleavage; displaces Cdk1p from elongating transcripts, especially as RNAPII reaches the poly(A) site, negatively regulates phosphorylation of the CTD of RNAPII, and inhibits RNAPII transcriptional elongation External sources
Open in SGD
Open in KEGG
Gene Sequence
Download FASTA View Seq
Sequence hidden Promoter Sequence
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>RAT1 YOR048C
ATGTCAATCTGATCGTTCATATGCATTTTTCAATTCTTACTTTTTTTCTCGAAGTTCCCG
ACTATGTTCTGTTTATTTTTTCTCCTATTCAAAAGAACCGGACAGCATTTTTACTTCCTT
ATATTTCGACATCGTAATATGTACATTTTTTAGTTCACAAGTATTTTTCCCCTTTCAATG
CTTTAATCAGCCTTCAACGTCATACATACTTTCTATTTTGTTCCTGTGCCATCGTATAAC
TTTCCTCGTTTAGTGTTTTCGCCTCAGCTTAATGTAGATCACTGTTTTGACGTTCTTCCA
TTTTTGGGAACGAACTAAACTAAAAAAAAGAAAACTACAGAGTTTCCCATAGAGAACAGA
AAATCCGCTATCGGCAGCTTATAGGGTCATATAATTATGGCGCACATAAGGAAAATAAAT
TTATTTGAATCAATCAACAGACCTATCTGTTGATATATGAAAGAGAGCAGGAGCGTTAGT
TTACCTCCATAAACAGTAAAATTAAAGCAAAAAAGCGTAACTGCTGATTGAAGCCTATAT
CACCGGGCTAAAATCTTATATCGGTTAAGAAAGTGATTAATTTATAGATATGTTCACGAA
ATCTTTTCTATTCAAAGATTCACGAATTTTACTCGATTTTTATAGTATACTGAAACAAGT
AGTTGTAAAATCAATTCACCAAAAAAGCTTTCCCCATCTCTGATGAAAAACTACGAAAAG
TTTACTATCACATAATATCGGAAGTACGTTTTTAAGGCACTGCAATGTATTTTATAATCT
TGAACATTTGGAGGTATATTACCTTACTTTCTCATCAGGTTGTATATTTGAGCGTCTCGG
GAATGATAAGTCGGGTAACGAGAGTATCTAGATAAGATTTTCAGCTATGGCAATAAAAAA
CCAAACCTCATCGATGAACCTATTACAACATAAAGACATCCCGTAATAATTAGTGAGACA
GGTTCTTCAAGGAAGTGCTACAGCCAAGTTTCGTAATATA
Chr coordinates
Chr XV from 421650-418630
