S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rim101p	YBR182C	PubMed Lamb TM et al., Mol Cell Biol, 2003 Jan;23(2):677-86	Direct	ChIP	N/A	YC11	Cells expressing Rim101-HAp grown to exponential phase in YPD medium
			Indirect	Northern blot - wt vs TF mutant	Negative	SK1	Cells grown to exponential phase in YPD medium
			Indirect	Microarray analysis - wt vs TF mutant	Negative	SK1	Cells grown to exponential phase in YPD medium
		PubMed Mira NP et al., FEMS Yeast Res, 2009 Mar;9(2):202-16	Indirect	Microarray analysis - wt vs TF mutant	Negative	S288c	Exponential phase cells cultivated in YNB (yeast nitrogen base), 2% glucose and 2.65 g/L NH4(SO4)2
		PubMed Yazawa H et al., Yeast, 2009 Mar;26(3):167-84	Indirect	RT-PCR - wt vs TF mutant	Negative	YHU3201	Alkaline stress - 240 mM K2HPO4
		PubMed Boysen JH et al., Eukaryot Cell, 2010 Apr;9(4):532-8	Indirect	RT-PCR - wt vs TF mutant	Negative	BY4741	wt vs DELTArim101 cells after a 120-min shift in YPD plus 0.1 M HEPES at pH 4.0 and pH 8.3
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Negative	S288c	YPD medium; mid-log phase
		PubMed Read T et al., PLoS Genet, 2016 Jan 11;12(1):e1005746	Indirect	RNA-seq - wt vs TF mutant	Negative	S288c	Cells were grown in standard YPD media to mid-log phase in YPD before RNA isolation
		PubMed Zhao H et al., Genetics, 2018 Mar;208(3):1181-1194	Indirect	RT-PCR - wt vs TF mutant	Negative	SK1	Up to 4h sporulation induced by rapamycin
		PubMed Zhao H et al., Genetics, 2018 Mar;208(3):1181-1194	Indirect	Western blot - wt vs TF mutant	Negative	SK1	Up to 4h sporulation induced by rapamycin