S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Swi4p	YDR225W	PubMed Simon I et al., Cell, 2001 Sep 21;106(6):697-708	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Workman CT et al., Science, 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Eriksson PR et al., Mol Cell Biol, 2011 Feb;31(3):557-72	Direct	EMSA	N/A	S288c	Cells were grown in synthetic complete (SC) medium to an optical density at 600 nm (OD600) of âˆ¼0.5. Cultures were synchronized with Î±-factor (10 Î¼g/ml) for 2 h at 30Â°C
		PubMed Hendler A et al., PLoS Genet, 2017 May 15;13(5):e1006778	Indirect	RNA-seq - wt vs TF mutant	Positive	15Daub	Strains were synchronized with alpha-factor and gene Indirect was measured at two time points (0, 30 minutes) after release.Â