S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Msn4p	YHR087W	PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Lai LC et al., Mol Cell Biol, 2005 May;25(10):4075-91	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	SSGal-TEA medium + anaerobiosis (0,08 generations)
		PubMed Horan S et al., Yeast, 2006 May;23(7):519-35	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303-1B	Cells harvested 60 min after treatment with 3 mM NO donor (Z)-1-[2-(2-aminoethyl)-N-(2-ammonioethyl) aminodiazen-1-ium-1,2-diolate (DETA NONOate)
		PubMed Eastmond DL et al., J Biol Chem, 2006 Oct 27;281(43):32909-21	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303-1A	Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min)
		PubMed Capaldi AP et al., Nat Genet, 2008;():Capaldi AP et al., Nat Genet, 2008;():	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium containing 0,8M glucose (glucose "osmotic" stress)
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Negative	S288c	YPD medium; mid-log phase
		PubMed Casado C et al., Biochem J, 2011 Sep 15;438(3):523-33	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	10 min shift to pH=8
		PubMed Weiner A et al., PLoS Biol, 2012;10(7):e1001369	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Diamide exposure-45min
		PubMed Bai C et al., PLoS One, 2020;15(8):e0237540	Indirect	BETA-galactosidase activity WT vs. TF double mutant + plasmid with promoter sequence	Positive	BY4741	YNB (-ura) + 0.7M NaCl (1 hour after exposure)
			Indirect	BETA-galactosidase activity WT vs. TF quadruple mutant + plasmid with promoter sequence	Positive	SP1	YNB (-ura) + 0.7M NaCl (1 hour after exposure)
			Indirect	BETA-galactosidase activity WT vs. TF triple mutant + plasmid with promoter sequence	Positive	BY4741	YNB (-ura) + 0.7M NaCl (1 hour after exposure)
			Indirect	RT-PCR - wt vs. TF double mutant	Positive	BY4741	YPD + 0,7M NaCl (1 hour after exposure)
			Indirect	RT-PCR - wt vs. TF quadruple mutant	Positive	BY4741	YPD + 0,7M NaCl (1 hour after exposure)
			Indirect	RT-PCR - wt vs. TF triple mutant	Positive	SP1	YPD + 0,7M NaCl (1 hour after exposure)