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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Rap1p
|
YKL039W
|
PubMed
Lieb JD et al., Nat Genet, 2001 Aug;28(4):327-34Lieb JD et al., Nat Genet, 2001 Aug;28(4):327-34 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Yarragudi A et al., Nucleic Acids Res, 2007;35(1):193-202Yarragudi A et al., Nucleic Acids Res, 2007;35(1):193-202 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
W303a |
Exponentially growing cells (OD600= 0.8 - 1.2) grown in YPD for 1 hour at 37.C |
PubMed
Kasahara K et al., Mol Cell Biol, 2007 Oct;27(19):6686-705Kasahara K et al., Mol Cell Biol, 2007 Oct;27(19):6686-705 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD |
PubMed
Venters BJ et al., Genome Res, 2009 Mar;19(3):360-71Venters BJ et al., Genome Res, 2009 Mar;19(3):360-71 |
Direct |
ChIP |
N/A |
S288c |
N/A |
PubMed
Lavoie H et al., PLoS Biol, 2010 Mar 9;8(3):e1000329Lavoie H et al., PLoS Biol, 2010 Mar 9;8(3):e1000329 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
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