The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Msn4p
|
YLR258W
|
PubMed
Parrou JL et al., Microbiology, 1997;():Parrou JL et al., Microbiology, 1997;(): |
Indirect |
lacZ - wt vs TF mutant |
Positive |
S288c |
37ÂșC |
PubMed
Rep M et al., J Biol Chem, 2000 Mar 24;275(12):8290-300Rep M et al., J Biol Chem, 2000 Mar 24;275(12):8290-300 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD + 0,5M NaCl |
PubMed
Enjalbert B et al., Mol Genet Genomics, 2004 Jul;271(6):697-708Enjalbert B et al., Mol Genet Genomics, 2004 Jul;271(6):697-708 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
S288c |
diauxic shift |
PubMed
Lai LC et al., Mol Cell Biol, 2005 May;25(10):4075-91Lai LC et al., Mol Cell Biol, 2005 May;25(10):4075-91 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
SSGal-TEA medium + anaerobiosis (0,19 generations) |
PubMed
Bandhakavi S et al., PLoS One, 2008;():Bandhakavi S et al., PLoS One, 2008;(): |
Indirect |
RT-PCR - wt vs TF mutant |
Negative |
n/a |
wt versus TF mutant YPD media 25.C mid exp cells |
PubMed
Capaldi AP et al., Nat Genet, 2008;():Capaldi AP et al., Nat Genet, 2008;(): |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium + 0,4M KCl (salt stress) |
PubMed
Watanabe D et al., Appl Environ Microbiol, 2011 Feb;77(3):934-41Watanabe D et al., Appl Environ Microbiol, 2011 Feb;77(3):934-41 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
Sake mash on day 5 |
PubMed
Casado C et al., Biochem J, 2011 Sep 15;438(3):523-33Casado C et al., Biochem J, 2011 Sep 15;438(3):523-33 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
10 min shift to pH=8 |
PubMed
Walden EA et al., PLoS Genet, 2020 Nov;16(11):e1009220Walden EA et al., PLoS Genet, 2020 Nov;16(11):e1009220 |
Indirect |
RT-PCR - wt vs TF mutant and western blot |
Positive |
BY4741 |
YPD medium |
|