S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rap1p	YNL067W	PubMed Lieb JD et al., Nat Genet, 2001 Aug;28(4):327-34	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50	Indirect	Microarray analysis - wt vs TF overexpression	Negative	N/A	Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h
		PubMed Yarragudi A et al., Nucleic Acids Res, 2007;35(1):193-202	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303a	Exponentially growing cells (OD600= 0.8 - 1.2) grown in YPD for 1 hour at 37.C
		PubMed Kasahara K et al., Mol Cell Biol, 2007 Oct;27(19):6686-705	Direct	Chip-on-chip	N/A	S288c	YPD
		PubMed Venters BJ et al., Genome Res, 2009 Mar;19(3):360-71	Direct	ChIP	N/A	S288c	N/A
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C