Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Dal80p
|
YDL210W
|
PubMed
Vissers S et al., Eur J Biochem, 1989 May 1;181(2):357-61Vissers S et al., Eur J Biochem, 1989 May 1;181(2):357-61 |
Indirect |
Enzyme activity - wt vs TF mutant |
Negative |
SIGMA1278b |
Medium + GABA |
PubMed
Talibi D et al., Nucleic Acids Res, 1995 Feb 25;23(4):550-7Talibi D et al., Nucleic Acids Res, 1995 Feb 25;23(4):550-7 |
Indirect |
lacZ - wt vs TF mutant |
Negative |
S288c |
minimal proline medium (0,1% proline) |
PubMed
André B et al., Nucleic Acids Res, 1995;():André B et al., Nucleic Acids Res, 1995;(): |
Indirect |
lacZ - wt vs TF mutant |
Negative |
S288c |
proline (0,1%) as the sole source of nitrogen (minimal medium) |
PubMed
Cunningham TS et al., J Bacteriol, 1994 Aug;176(15):4718-25Cunningham TS et al., J Bacteriol, 1994 Aug;176(15):4718-25 |
Direct |
EMSA |
N/A |
S288c |
in vitro |
PubMed
Cunningham TS et al., J Bacteriol, 1993 Sep;175(18):5851-61Cunningham TS et al., J Bacteriol, 1993 Sep;175(18):5851-61 |
Direct |
EMSA |
N/A |
S288c |
in vitro |
PubMed
Coffman JA et al., J Bacteriol, 1997 Jun;179(11):3416-29Coffman JA et al., J Bacteriol, 1997 Jun;179(11):3416-29 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
TCY1 |
Minimal medium + proline |
Indirect |
Northern blot - wt vs TF overexpression |
Positive |
TCY1 |
Minimal medium + proline |
PubMed
Cox KH et al., Yeast, 1999 Jun 15;15(8):703-13Cox KH et al., Yeast, 1999 Jun 15;15(8):703-13 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
TCY1 |
Wickerham's minimal medium with 0,6% glucose and 0,1% of proline |
PubMed
Garcia SC et al., FEMS Microbiol Lett, 2000 Mar 15;184(2):219-24Garcia SC et al., FEMS Microbiol Lett, 2000 Mar 15;184(2):219-24 |
Indirect |
lacZ - wt vs TF mutant |
Negative |
S288c |
Minimal proline medium 2 (MPM2 -in 1 l it contained 0.7 g MgSO4W7H2O, 1 g KH2PO4, 0.4 g CaCl2.2H20, 0.5 g NaCl, 1 g K2SO4, 10.5 g citric acidWH2O, 10 ml vitamin solution (250 mg D-biotin, 100 mg thiamineWHCl, 1 g myo-inositol, 200 mg calcium pantothenate and 100 mg pyridoxineWHCl per liter) and 1 ml of trace metal solution (10 mg H3BO3, 1 mg CuSO4W5H2O, 2 mg KI, 4 mg Na2MoO4W2H2O, 14 mg ZnSO4W7H2O |
PubMed
Georis I et al., Mol Cell Biol, 2009 Jul;29(13):3803-15Georis I et al., Mol Cell Biol, 2009 Jul;29(13):3803-15 |
Indirect |
RT-PCR - wt vs TF mutant |
Negative |
S288c |
Exponential-phase cells cultivated in synthetic growth medium containing 0.1% proline as nitrogen source |
PubMed
Deed NK et al., Appl Microbiol Biotechnol, 2011 Mar;89(5):1537-49Deed NK et al., Appl Microbiol Biotechnol, 2011 Mar;89(5):1537-49 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
wine fermentation exponential phase |
PubMed
Cardillo SB et al., Microbiology, 2012;():Cardillo SB et al., Microbiology, 2012;(): |
Direct |
ChIP |
N/A |
S288c |
Minimal Media + GABA |
PubMed
Levi CE et al., Biochem Biophys Res Commun, 2012 May 11;421(3):572-7Levi CE et al., Biochem Biophys Res Commun, 2012 May 11;421(3):572-7 |
Direct |
ChIP |
N/A |
S288c |
Exponential phase cells cultivated in minimal growth medium containing acetate and GABA |
PubMed
Palavecino-Ruiz M et al., Microbiology, 2017 Nov;163(11):1692-1701Palavecino-Ruiz M et al., Microbiology, 2017 Nov;163(11):1692-1701 |
Indirect |
lacZ - wt vs TF mutant |
Negative |
23344c |
Minimal medium containing a 0.17% Difco yeast nitrogen base (YNB without amino acids and ammonium sulphate), 2% glucose and 10mM proline. |
Indirect |
lacZ - wt vs TF mutant |
Negative |
23344c |
Minimal medium (0.17% Difco yeast nitrogen base, 2% glucose and 10mM proline) after incubation with 0.1mM GABA during 1h . |
Indirect |
lacZ - wt vs TF mutant |
Negative |
23344c |
wt and DELTAdal80 cells carrying the Yep-357-UGA4-lacZ plasmid were grown on 10mM proline and/or not incubated with 0.1mM GABA for 60 min |
Indirect |
lacZ - wt vs TF mutant |
Negative |
23344c |
wt and DELTAgzf3DELTAdal80 cells carrying the Yep-357-UGA4-lacZ plasmid were grown on 10mM proline and/or not incubated with 0.1mM GABA for 60 min |
Indirect |
lacZ - wt vs TF mutant |
Negative |
23344c |
wt and DELTAdal80DELTAleu3 cells carrying the Yep-357-UGA4-lacZ plasmid were grown on 10mM proline and/or not incubated with 0.1mM GABA for 60 min |
Indirect |
lacZ - wt vs TF mutant |
Negative |
23344c |
wt and DELTAgzf3DELTAdal80DELTAleu3 cells carrying the Yep-357-UGA4-lacZ plasmid were grown on 10mM proline and/or not incubated with 0.1mM GABA for 60 min |
Indirect |
RT-PCR - wt vs TF mutant |
N/A |
23344c |
Cells expressing HA-Dal80 were grown on proline without GABA vs incubated with 0.1 mM GABA for 30 min. ChIPs assays were carried out using antibodies against the HA epitope. |