S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Hsf1p	YFL014W	PubMed Treger JM et al., J Biol Chem, 1998 Oct 9;273(41):26875-9	Indirect	Northern blot - wt vs TF mutant	Positive	JT659	Heat-shock treatment
		PubMed Boy-Marcotte E et al., Mol Microbiol, 1999 Jul;33(2):274-83	Indirect	Proteomics - wt vs TF mutant	Positive	MYY290	Heat-shock: Exponential-phase cells shifted from 25C to 38C
		PubMed Yamamoto A et al., J Biol Chem, 2005 Mar 25;280(12):11911-9	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium 39ºC (heat shock)
		PubMed Workman CT et al., Science, 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50	Indirect	Microarray analysis - wt vs TF overexpression	Positive	N/A	Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h
		PubMed Eastmond DL et al., J Biol Chem, 2006 Oct 27;281(43):32909-21	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303-1A	Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min)
		PubMed Erkina TY et al., Mol Cell Biol, 2008 Feb;28(4):1207-17	Direct	ChIP	N/A	S288c	N/A
		PubMed Wang S et al., Nucleic Acids Res, 2010 Aug;38(15):e154	Indirect	RT-PCR - wt vs TF overexpression	Positive	S288c	Sgal-Ura_His media + Heat Shock
		PubMed Chowdhary S et al., Cell Rep, 2019 Jan 2;26(1):18-28.e5	Direct	ChIP	N/A	BY4741	YPDA heat-shocked, subjected to 39.C thermal upshift (10min)
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C