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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Condition
Hsf1p YPL240C PubMed external link Giardina C et al., Mol Cell Biol, 1995 May;15(5):2737-44Giardina C et al., Mol Cell Biol, 1995 May;15(5):2737-44 Direct DNA footprinting N/A S288c Heat shock
PubMed external link Zarzov P et al., J Cell Sci, 1997;():Zarzov P et al., J Cell Sci, 1997;(): Indirect Proteomics - wt vs TF mutant Positive S288c 24oC/37oC - heat shock
PubMed external link Treger JM et al., J Biol Chem, 1998 Oct 9;273(41):26875-9Treger JM et al., J Biol Chem, 1998 Oct 9;273(41):26875-9 Indirect Northern blot - wt vs TF mutant Positive JT659 Heat-shock treatment
PubMed external link Boy-Marcotte E et al., Mol Microbiol, 1999 Jul;33(2):274-83Boy-Marcotte E et al., Mol Microbiol, 1999 Jul;33(2):274-83 Indirect Proteomics - wt vs TF mutant Positive MYY290 Heat-shock: Exponential-phase cells shifted from 25C to 38C
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c N/A
PubMed external link Yamamoto A et al., J Biol Chem, 2005 Mar 25;280(12):11911-9Yamamoto A et al., J Biol Chem, 2005 Mar 25;280(12):11911-9 Indirect Northern blot - wt vs TF mutant Positive S288c YPD medium 39ºC (heat shock)
PubMed external link Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 Direct Chip-on-chip N/A S288c N/A
PubMed external link Eastmond DL et al., J Biol Chem, 2006 Oct 27;281(43):32909-21Eastmond DL et al., J Biol Chem, 2006 Oct 27;281(43):32909-21 Indirect Microarray analysis - wt vs TF mutant Positive W303-1A Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min)
PubMed external link Erkina TY et al., Mol Cell Biol, 2008 Feb;28(4):1207-17Erkina TY et al., Mol Cell Biol, 2008 Feb;28(4):1207-17 Direct ChIP N/A S288c N/A
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Wang S et al., Nucleic Acids Res, 2010 Aug;38(15):e154Wang S et al., Nucleic Acids Res, 2010 Aug;38(15):e154 Indirect RT-PCR - wt vs TF overexpression Positive S288c Sgal-Ura_His media + Heat Shock
PubMed external link Solís EJ et al., Mol Cell, 2016 Jul 7;63(1):60-71Solís EJ et al., Mol Cell, 2016 Jul 7;63(1):60-71 Indirect Net-seq Positive S288c basal conditions
PubMed external link Pincus D et al., Mol Biol Cell, 2018 Dec 15;29(26):3168-3182Pincus D et al., Mol Biol Cell, 2018 Dec 15;29(26):3168-3182 Direct ChIP-seq N/A BY4741 YPDA (with 0.002% adenine), non-heat shock, 5´heat shock and 120´heat shock
Direct ChIP-seq N/A BY4741 YPDA (with 0.002% adenine) Rapamycin (1 microM), non-heat shock
Direct ChIP-seq N/A BY4741 YPDA (with 0.002% adenine), 5' heat shock
Indirect NAC-seq (nascent mRNA-sequencing) Positive BY4741 YPDA (with 0.002% adenine) Rapamycin (1 microM), non-heat shock
Indirect NAC-seq (nascent mRNA-sequencing) Positive BY4741 YPDA (with 0.002% adenine), 5' heat shock
PubMed external link Chowdhary S et al., Cell Rep, 2019 Jan 2;26(1):18-28.e5Chowdhary S et al., Cell Rep, 2019 Jan 2;26(1):18-28.e5 Direct ChIP N/A BY4741 YPDA
Direct ChIP N/A BY4741 YPDA pretreated with rapamycin for 90 min
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C
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