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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Condition
Ino4p YBR177C PubMed external link Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 Direct Chip-on-chip N/A S288c N/A
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Negative S288c YPD medium; mid-log phase
PubMed external link Chumnanpuen P et al., BMC Syst Biol, 2013;():Chumnanpuen P et al., BMC Syst Biol, 2013;(): Indirect Microarray analysis - wt vs TF mutant Positive S288c Steady-state aerobic chemostat 30.C
PubMed external link Zhu X et al., Genetics, 2015 Oct;201(2):525-42Zhu X et al., Genetics, 2015 Oct;201(2):525-42 Indirect RNA-seq - wt vs TF mutant Positive S288c YPA
PubMed external link Bergenholm D et al., mSystems, 2018 Jul-Aug;3(4):Bergenholm D et al., mSystems, 2018 Jul-Aug;3(4): Direct ChIP-exo N/A CEN.PK 113-5D Steady state aerobic chemostat cultivation at 30 .C in nitrogen-limited minimal medium containing vitamins and trace metals and maintained at pH 5.0
Direct ChIP-exo N/A CEN.PK 113-5D Steady state aerobic chemostat cultivation at 30 .C in glucose-limited minimal medium containing vitamins and trace metals and maintained at pH 5.0
Direct ChIP-exo N/A CEN.PK 113-5D Steady state chemostat cultivation at 30 .C in oxygen- and glucose-limited minimal medium containing vitamins and trace metals and maintained at pH 5.0
Direct ChIP-exo N/A CEN.PK 113-5D Steady state aerobic chemostat cultivation at 30 .C in ethanol-limited minimal medium containing vitamins and trace metals and maintained at pH 5.0
PubMed external link Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 Direct ChIP-exo N/A CEN.PK 113-5D Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
Direct ChIP-exo N/A CEN.PK 113-5D Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
Direct ChIP-exo N/A CEN.PK 113-5D Cells were cultivated in chemostats in nitrogen limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
Direct ChIP-exo N/A CEN.PK 113-5D Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C
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