S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Ino4p	YCL004W	PubMed Shen H et al., J Biol Chem, 1998 May 8;273(19):11638-42	Indirect	lacZ - wt vs TF mutant	Positive	S288c	Inositol presence
		PubMed DzugasovÃ¡ V et al., Curr Genet, 1998 Oct;34(4):297-302	Indirect	lacZ - wt vs TF mutant	Positive	S288c	cells grown to mid log phase in synthetic medium lacking inositol / choline (derepressing conditions)
		PubMed Workman CT et al., Science, 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Bergenholm D et al., mSystems, 2018 Jul-Aug;3(4):	Direct	ChIP-exo	N/A	CEN.PK 113-5D	Steady state aerobic chemostat cultivation at 30 .C in glucose-limited minimal medium containing vitamins and trace metals and maintained at pH 5.0
		PubMed Bergenholm D et al., mSystems, 2018 Jul-Aug;3(4):	Direct	ChIP-exo	N/A	CEN.PK 113-5D	Steady state chemostat cultivation at 30 .C in oxygen- and glucose-limited minimal medium containing vitamins and trace metals and maintained at pH 5.0
		PubMed Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000	Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h