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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Condition
Rpn4p YER012W PubMed external link London MK et al., FEBS Lett, 2004;():London MK et al., FEBS Lett, 2004;(): N/A N/A S288c N/A
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c N/A
PubMed external link Ju D et al., Biochem Biophys Res Commun, 2004 Aug 13;321(1):51-7Ju D et al., Biochem Biophys Res Commun, 2004 Aug 13;321(1):51-7 Indirect Western blot - wt vs TF overexpression Positive S288c SC medium; mid-log phase
PubMed external link Haugen AC et al., Genome Biol, 2004;5(12):R95Haugen AC et al., Genome Biol, 2004;5(12):R95 Indirect Microarray analysis - wt vs TF mutant Positive BY4741 Synthetic complete medium after 2h exposure to 100 microM AsIII (30.C).
PubMed external link Salin H et al., BMC Genomics, 2008 Jul 15;0(0):33Salin H et al., BMC Genomics, 2008 Jul 15;0(0):33 Indirect Microarray analysis - wt vs TF mutant Negative BY4742 YPD
Indirect Microarray analysis - wt vs TF mutant Negative BY4742 YPD+1mM selenite 40 min
Indirect Microarray analysis - wt vs TF mutant Negative BY4742 YPD+1mM selenite 60 min
Indirect Microarray analysis - wt vs TF mutant Negative BY4742 YPD+1mM selenite 80 min
PubMed external link Ju D et al., Int J Biochem Cell Biol, 2010 Feb;42(2):282-6Ju D et al., Int J Biochem Cell Biol, 2010 Feb;42(2):282-6 Indirect RT-PCR - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Wang X et al., Genetics, 2010 Feb;184(2):335-42Wang X et al., Genetics, 2010 Feb;184(2):335-42 Indirect RT-PCR - wt vs TF mutant Positive YXY210 N/A
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Kruegel U et al., PLoS Genet, 2011 Sep;7(9):e1002253Kruegel U et al., PLoS Genet, 2011 Sep;7(9):e1002253 Indirect RT-PCR - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Karpov DS et al., FEBS Lett, 2013 Sep 17;587(18):3108-14Karpov DS et al., FEBS Lett, 2013 Sep 17;587(18):3108-14 Direct DamID system Wild-type vs Mutated bingind site N/A S288c normal growth conditions
PubMed external link Karpov DS et al., FEMS Yeast Res, 2017 Jan 1;17(1):Karpov DS et al., FEMS Yeast Res, 2017 Jan 1;17(1): Indirect RT-PCR - wt vs TF mutant Positive BY4742 no info
PubMed external link Zhang T et al., FEMS Microbiol Lett, 2017 Dec 1;364(22):Zhang T et al., FEMS Microbiol Lett, 2017 Dec 1;364(22): Indirect RT-PCR - wt vs TF mutant Positive W303 YPD 30.C
PubMed external link Karpov DS et al., FEMS Yeast Res, 2019 Mar 1;19(2):Karpov DS et al., FEMS Yeast Res, 2019 Mar 1;19(2): Indirect RT-PCR - wt vs TF mutant Positive BY4742 no stress
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C
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