Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Rtg3p
|
YLR304C
|
PubMed
Liao X et al., Cell, 1993 Jan 15;72(1):61-71Liao X et al., Cell, 1993 Jan 15;72(1):61-71 |
N/A |
|
N/A |
S288c |
N/A |
PubMed
Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
PSY142 |
rho0 cells cultivated in YP medium with 2% raffinose |
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chen XJ et al., Proc Natl Acad Sci U S A, 2007 Aug 21;104(34):13738-43Chen XJ et al., Proc Natl Acad Sci U S A, 2007 Aug 21;104(34):13738-43 |
Indirect |
Western blot - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in nitrogen limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |