S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rtg3p	YNL037C	PubMed Liao X et al., Cell, 1993 Jan 15;72(1):61-71	N/A		N/A	S288c	N/A
		PubMed Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8	Indirect	Northern blot - wt vs TF mutant	Positive	PSY142	rho0 cells cultivated in YP medium with 2% raffinose
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Zyrina AN et al., Appl Environ Microbiol, 2017 Feb 1;83(3):	Indirect	GFP - wt vs TF mutant	Positive	S288c	SOD2 repressed cells were grown overnight at 30.C with 106 rotary shaking (250 rpm) to the density of 2 x 106 cells mL-1 in liquid YPD medium
			Indirect	GFP - wt vs TF mutant	Positive	MATa ade2-1 trp1-1 can1-100 leu2-3,112 his3-11,15 ura3 cdc13-1 IDH1-GFP	Idh1-GFP mutant vs Idh1-GFP DELTArtg3 mutant: cells were grown in YPD medium
		PubMed Chow J et al., Genetics, 2019 Jul;212(3):667-690	Indirect	RNA-seq - wt vs TF mutant	Positive	PC538	YEP-Gal solid medium for 24 hr
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C