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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Condition
Swi4p YMR199W PubMed external link Dirick L et al., Nature, 1992 Jun 11;357(6378):508-13Dirick L et al., Nature, 1992 Jun 11;357(6378):508-13 N/A N/A S288c N/A
PubMed external link Ogas J et al., Cell, 1991 Sep 6;66(5):1015-26Ogas J et al., Cell, 1991 Sep 6;66(5):1015-26 N/A N/A S288c N/A
PubMed external link Nasmyth K et al., Cell, 1991 Sep 6;66(5):995-1013Nasmyth K et al., Cell, 1991 Sep 6;66(5):995-1013 N/A N/A S288c N/A
PubMed external link Wittenberg C et al., Cell, 1990 Jul 27;62(2):225-37Wittenberg C et al., Cell, 1990 Jul 27;62(2):225-37 N/A N/A S288c N/A
PubMed external link Toone WM et al., EMBO J, 1995 Dec 1;14(23):5824-32Toone WM et al., EMBO J, 1995 Dec 1;14(23):5824-32 Indirect Northern blot - wt vs TF mutant Positive W303 SC medium 37.C
PubMed external link Partridge JF et al., J Biol Chem, 1997 Apr 4;272(14):9071-7Partridge JF et al., J Biol Chem, 1997 Apr 4;272(14):9071-7 Indirect lacZ - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Iyer VR et al., Nature, 2001 Jan 25;409(6819):533-8Iyer VR et al., Nature, 2001 Jan 25;409(6819):533-8 Direct Chip-on-chip N/A S288c N/A
PubMed external link Simon I et al., Cell, 2001 Sep 21;106(6):697-708Simon I et al., Cell, 2001 Sep 21;106(6):697-708 Direct Chip-on-chip N/A S288c YPD medium; mid-log phase
PubMed external link Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 Direct Chip-on-chip N/A S288c YPD medium; mid-log phase
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c YPD medium; mid-log phase
PubMed external link Bean JM et al., Genetics, 2005 Sep;171(1):49-61Bean JM et al., Genetics, 2005 Sep;171(1):49-61 Indirect Northern blot - wt vs TF mutant Positive S288c Expression along cell cycle
PubMed external link Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 Direct Chip-on-chip N/A S288c N/A
PubMed external link Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50 Indirect Microarray analysis - wt vs TF mutant Positive N/A Cells grown in synthetic medium supplemented with 2% dextrose
PubMed external link Venters BJ et al., Genome Res, 2009 Mar;19(3):360-71Venters BJ et al., Genome Res, 2009 Mar;19(3):360-71 Direct ChIP N/A S288c N/A
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Hendler A et al., PLoS Genet, 2017 May 15;13(5):e1006778Hendler A et al., PLoS Genet, 2017 May 15;13(5):e1006778 Indirect RNA-seq - wt vs TF mutant Positive 15Daub Strains were synchronized with alpha-factor and gene Indirect was measured at two time points (0, 30 minutes) after release. 
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C
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