Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Swi4p YBR183W PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Negative BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. -0.47094559341414
PubMed external link Hendler A et al., PLoS genetics, 2017 May;13(5):e1006778Hendler A et al., PLoS genetics, 2017 May;13(5):e1006778 Indirect RNA-seq analysis - WT vs TF Deletion Negative 15Daub Unstressed log-phase growth (control) Yeast growth media (yeast-peptone-dextrose [YPD], yeast-peptone-acetate, and synthetic complete) were of standard composition -0.404407834693918
Indirect RNA-seq analysis - WT vs TF Deletion Negative 15Daub Cell cycle/morphology Cells were grown in 7 ml of SC over-night at 30°C. Cells were synchronized by alpha factor arrest and release and after 30 minutes they were collected. Transcription factor gene deletion. -0.404407834693918
PubMed external link Matos GS et al., Biochimica et biophysica acta. Molecular and cell biology of lipids, 2021 Sep;1866(9):158983Matos GS et al., Biochimica et biophysica acta. Molecular and cell biology of lipids, 2021 Sep;1866(9):158983 Indirect RT-PCR - wt vs. TF mutant Negative BY4741 Cell cycle/morphology Cells were cultivated to exponential phase in YPD medium and G1 synchronized with alpha factor. Cells were then released in minimal medium (SD medium) and harvested after 45 or 60 min N/A