S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Ste12p	YCL055W	PubMed Kurihara LJ et al., Mol Cell Biol, 1996 Aug;16(8):3990-4002	Indirect	Northern blot - WT vs TF mutant	Positive	MS10	alpha-factor
		PubMed Madhani HD et al., Proc Natl Acad Sci U S A, 1999 Oct 26;96(22):12530-5	Indirect	Microarray analysis - WT vs TF mutant	Positive	S288c	Pseudohyphal growth conditions (4h of growth in yeast nitrogen base containing 50 Î¼M ammonium sulfate)
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed LefranÃ§ois P et al., BMC Genomics, 2009;():	Direct	ChIP-seq	N/A	S288c	Pseudohyphal growth conditions (nitrogen depleted SLAD medium)
		PubMed Zheng W et al., Nature, 2010 Apr 22;464(7292):1187-91	Direct	ChIP-seq	N/A	S288c	YPD medium + alpha-factor
		PubMed Arroyo J et al., Mol Microbiol, 2011;():	Indirect	RT-PCR - WT vs TF mutant	Negative	S288c	Yeast strains were grown in YPDt o an optical density (OD600) of 0.1. Cultures were split up and treated with OGT2468 at final concentrations of 0.1 µM or 1 µM, and DMSO (final concentration 1%) for 3h
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C