S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Cbf1p	YCR005C	PubMed Moxley JF et al., Proceedings of the National Academy of Sciences of the United States of America, 2009 Apr 21;106(16):6477-82	Indirect	Microarray analysis - wt vs TF mutant	Negative	BY4741	Unstressed log-phase growth (control)	YNB media supplemented with 20 mg/L methionine	N/A
		PubMed Iwai K et al., The Journal of biological chemistry, 2010 Apr 2;285(14):10597-604	Indirect	lacZ - wt vs TF mutant	Negative	BY4742	Ion/metal/phosphate/sulfur/vitamin availability	CIT2-lacZ reporter gene was transformed into a wt vs isogenic bHLH knock-out RO+ strains (DELTAcbf1 with mitochondrial DNA). CIT2-lacZ expression was assayed from cultures grown in the absence (I-C-) of inositol and choline with high-phosphate (Pi high) or in the presence of I+C+ containing either low-phosphate (Pi low) or high-phosphate (Pi high).	N/A
			Indirect	lacZ - wt vs TF mutant	Negative	BY4742	Ion/metal/phosphate/sulfur/vitamin availability	CIT2-lacZ reporter gene was transformed into a wt vs isogenic bHLH knock-out RO+ strains (DELTAcbf1 without mitochondrial DNA). CIT2-lacZ expression was assayed from cultures grown in the absence (I-C-) of inositol and choline with high-phosphate (Pi high) or in the presence of I+C+ containing either low-phosphate (Pi low) or high-phosphate (Pi high).	N/A
		PubMed Holland P et al., Nucleic acids research, 2019 Jun 4;47(10):4986-5000	Direct	ChIP-exo	N/A	CEN.PK 113-5D	Carbon source quality/availability	Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h	N/A
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Nitrogen source quality/availability	Cells were cultivated in chemostats in nitrogen limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h	N/A
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Carbon source quality/availability	Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h	N/A