S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Swi5p	YDL227C	PubMed Dohrmann PR et al., Genes & development, 1992 Jan;6(1):93-104	Indirect	lacZ - wt vs TF mutant	Positive	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Breeden L et al., Cell, 1987 Feb 13;48(3):389-97	Indirect	Northern blot - wt vs TF mutant	Positive	G45	Unstressed log-phase growth (control)	YPD	N/A
		PubMed Dohrmann PR et al., Molecular and cellular biology, 1996 Apr;16(4):1746-58	Direct	DNA footprinting	N/A	S288c	In vitro	in vitro	N/A
		PubMed McBride HJ et al., The Journal of biological chemistry, 1999 Jul 23;274(30):21029-36	Direct	DNA footprinting	Positive	W303	Unstressed log-phase growth (control)	Exponential-phase cells cultivated in synthetic growth medium	N/A
		PubMed Madhani HD et al., Proceedings of the National Academy of Sciences of the United States of America, 1999 Oct 26;96(22):12530-5	Direct	ChIP	N/A	S288c	Cell cycle/morphology	Synchronized cells at G1 phase	N/A
		PubMed Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Voth WP et al., The EMBO journal, 2007 Oct 17;26(20):4324-34	Direct	Chip-on-chip	N/A	S288c	N/A	N/A	N/A
		PubMed Takahata S et al., The Journal of biological chemistry, 2011 Oct 7;286(40):34809-19	Direct	ChIP	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Parnell EJ et al., The Journal of biological chemistry, 2014 Dec 19;289(51):35431-7	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Unstressed log-phase growth (control)	SC medium	N/A
		PubMed Qiu H et al., Genome research, 2016 Feb;26(2):211-25	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Unstressed log-phase growth (control)	logarithmically growing cells	N/A
		PubMed Parnell EJ et al., Genetics, 2019 Aug;212(4):1181-1204	Indirect	RT-PCR - wt vs. TF mutant	Positive	W303	Unstressed log-phase growth (control)	YPA ( 2% dextrose), 30.C	N/A
		PubMed Jordá T et al., Biochimica et biophysica acta. Molecular and cell biology of lipids, 2020 Aug;1865(8):158707	Direct	ChIP	N/A	W303	Cell cycle/morphology	Synchronized growing cells (GALp::CDC20 strain grown at 25. in yeast extract and peptone medium containing 2% galactose and 2% raffinose)	N/A
			Indirect	RT-PCR - wt vs. TF mutant	Positive	W303	Unstressed log-phase growth (control)	YPD medium 30.C	N/A