Yeastract
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Condition
Fkh1p YDR146C PubMed external link Zhu G et al., Nature, 2000 Jul 6;406(6791):90-4Zhu G et al., Nature, 2000 Jul 6;406(6791):90-4 Indirect Northern blot - WT vs TF mutant N/A W303 0-180 min after release of G1 phase synchronization
Indirect Microarray analysis - WT vs TF mutant Positive W303 15, 30, 45, 60 min after release of G1 phase synchronization
PubMed external link Koranda M et al., Nature, 2000 Jul 6;406(6791):94-8Koranda M et al., Nature, 2000 Jul 6;406(6791):94-8 Direct ChIP N/A S288c N/A
PubMed external link Kumar R et al., Curr Biol, 2000;():Kumar R et al., Curr Biol, 2000;(): Indirect Gus - WT vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Knott SR et al., Cell, 2012;():Knott SR et al., Cell, 2012;(): Direct ChIP-seq Negative S288c G1-phase arrested cells
PubMed external link Ostrow AZ et al., PLoS One, 2014;9(2):e87647Ostrow AZ et al., PLoS One, 2014;9(2):e87647 Direct Chip-on-chip N/A S288c Unspecified medium, 23.C, synchronized with alpha-factor, hydroxyurea or nocodazole
PubMed external link Shi BJ, Biochem J, 2016 Nov 1;473(21):3855-3869Shi BJ, Biochem J, 2016 Nov 1;473(21):3855-3869 Direct ChIP N/A S288c Synchronous growth
PubMed external link Aref R et al., Curr Genet, 2021 Jun;67(3):487-499Aref R et al., Curr Genet, 2021 Jun;67(3):487-499 Direct ChIP N/A C13-ABY.S86 Non-synchronized wild-type cells
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