S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Hot1p	YDR536W	PubMed Garcia SC et al., FEMS microbiology letters, 2000 Mar 15;184(2):219-24	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Stress	YPD + 0,7M NaCl	N/A
		PubMed Alepuz PM et al., Molecular cell, 2001 Apr;7(4):767-77	Direct	ChIP	N/A	S288c	Stress	yeast cultures were grown to early log phase and exposed 5 min to high osmolarity stress (4 M NaCl to a final concentration of 0.4 M.)	N/A
		PubMed Alepuz PM et al., The EMBO journal, 2003 May 15;22(10):2433-42	Direct	ChIP	N/A	S288c	Stress	Osmotic stress	N/A
		PubMed Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6	Direct	ChIP	N/A	S288c	N/A	N/A	N/A
		PubMed Ni L et al., Genes & development, 2009 Jun 1;23(11):1351-63	Direct	Chip-on-chip	N/A	S288c	Stress	SD medium + NaCl 0,6M 30'	N/A
		PubMed Cook KE et al., G3 (Bethesda, Md.), 2012 Sep;2(9):1129-36	Direct	ChIP-seq	N/A	S288c	Stress	0,4M NaCl	N/A
		PubMed Burns LT et al., The Journal of biological chemistry, 2014 Jun 20;289(25):17668-79	Direct	ChIP	N/A	S288c	Stress	Cells grown in YPD Wt, Dcka2, and exposed to salt stress (0.4 M NaCl)	N/A
		PubMed Bai C et al., Molecular biology of the cell, 2015 Jun 15;26(12):2357-74	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741	Stress	Expression levels after 60min exposure to 0.9 M KCl. Grown in YNB medium, or yeast/peptone/dextrose (YPD) medium.	N/A
			Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741	Stress	Expression levels after 60min exposure to 0.9 M NaCl. Grown in YNB medium, or yeast/peptone/dextrose (YPD) medium.	N/A
			Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741	Stress	Expression levels after 60min exposure to 1 M sorbitol. Grown in YNB medium, or yeast/peptone/dextrose (YPD) medium.	N/A
		PubMed Gomar-Alba M et al., Biochimica et biophysica acta, 2015 Dec;1849(12):1385-97	Direct	ChIP	N/A	S288c	Stress	exponentially growing cells were left untreated (control) or exposed to salt osmostress (NaCl 0.4 M) for 10 min	N/A
		PubMed Li T et al., Biochimica et biophysica acta, 2016 Feb;1859(2):405-19	Direct	ChIP	N/A	S288c	Stress	0.6 M KCl treatment for 25 min	N/A
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	Unstressed log-phase growth (control)	YPD medium, 25.C	N/A