S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Ace2p	YER124C	PubMed Madhani HD et al., Proceedings of the National Academy of Sciences of the United States of America, 1999 Oct 26;96(22):12530-5	Direct	ChIP	N/A	S288c	Cell cycle/morphology	Exponential phase cells cultivated in YPD growth medium (40 minutes after cell-cycle synchronization)	N/A
		PubMed Doolin MT et al., Molecular microbiology, 2001 Apr;40(2):422-32	Indirect	Northern blot - wt vs TF mutant	Positive	H9	Unstressed log-phase growth (control)	Cells grown in YPD media to mid-logarithmic phase	N/A
		PubMed Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	N/A	N/A	N/A
		PubMed Workman CT et al., Science (New York, N.Y.), 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A	N/A	N/A
		PubMed Voth WP et al., The EMBO journal, 2007 Oct 17;26(20):4324-34	Direct	Chip-on-chip	N/A	S288c	N/A	N/A	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	1.6887313109883
		PubMed Lupo O et al., G3 (Bethesda, Md.), 2021 Feb 9;11(2):	Direct	ChEC-seq	N/A	BY4743	Unstressed log-phase growth (control)	YPD medium	N/A
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	Unstressed log-phase growth (control)	YPD medium, 25.C	N/A