Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Yrr1p YER177W PubMed external link Le Crom S et al., Molecular and cellular biology, 2002 Apr;22(8):2642-9Le Crom S et al., Molecular and cellular biology, 2002 Apr;22(8):2642-9 Indirect Microarray analysis - TF GOF vs WT Negative SEY6210 Unstressed log-phase growth (control) 100 ml of cell culture grown to OD600nm (600 nm) of 1.5. -0.27965071
PubMed external link Gallagher JE et al., Genes & development, 2014 Feb 15;28(4):409-21Gallagher JE et al., Genes & development, 2014 Feb 15;28(4):409-21 Direct ChIP-seq N/A S288c Unstressed log-phase growth (control) YPD N/A
PubMed external link Wang X et al., Frontiers in microbiology, 2017;8():367Wang X et al., Frontiers in microbiology, 2017;8():367 Indirect RNA-seq analysis - WT vs TF Deletion Positive BY4741 Unstressed log-phase growth (control) Cells harvested from 300 ml of culture (specific medium not clear) at an OD600 of 0.4. Transcription factor gene overexpression pAFT2-1up vs aft2Δ strain. 0.631952966030475
Indirect RNA-seq analysis - WT vs TF Deletion Positive BY4741 Stress Grown in SD medium until log phase (OD600 ≈ 1.6-2.0) at 30 ºC, in the presence of 5 mM vanillin (inhibitor). Transcription factor gene deletion. 0.631952966030475