S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Mac1p	YFR055W	PubMed Dormer UH et al., The Journal of biological chemistry, 2000 Oct 20;275(42):32611-6	Indirect	Microarray analysis - wt vs TF overexpression	Positive	S288c	Ion/metal/phosphate/sulfur/vitamin availability	low copper complete medium	N/A
		PubMed James Theoga Raj C et al., The Journal of biological chemistry, 2019 Apr 5;294(14):5562-5575	Indirect	RNA-seq analysis - WT vs TF Deletion	N/A	BY4742	Unstressed log-phase growth (control)	Grown in liquid synthetic minimal medium (YNB) with arginine at 30°C overnight, diluted and cultivated to mid-log phase before isolation of total RNA. 10 mM 3-amino-triazole (3AT) was added to cultures grown to mid-log phase for further 8 h. Transcription factor gene deletion.	1.26631065989731
			Indirect	RNA-seq analysis - WT vs TF Deletion	N/A	BY4742	Unstressed log-phase growth (control)	Grown in SD medium. Transcription factor gene deletion.	1.26631065989731
		PubMed Yang L et al., Biotechnology for biofuels, 2019;12():30	Indirect	RT-PCR - wt vs TF overexpression	Positive	1308	Stress	NO-treated biofilm cells	N/A
			Indirect	RT-PCR - wt vs. TF mutant	Positive	1308	Stress	NO-treated biofilm cells	N/A
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	Unstressed log-phase growth (control)	YPD medium, 25.C	N/A