S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Rap1p	YGL008C	PubMed Capieaux E et al., The Journal of biological chemistry, 1989 May 5;264(13):7437-46	Direct	EMSA	N/A	S288c	In vitro	in vitro	N/A
		PubMed Workman CT et al., Science (New York, N.Y.), 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A	N/A	N/A
		PubMed Ahn SH et al., The EMBO journal, 2009 Feb 4;28(3):205-12	Direct	ChIP	N/A	S288c	N/A	N/A	N/A
		PubMed Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47	Indirect	RNA-seq - wt vs TF overexpression	Positive	CEN.PK2-1D	Carbon source quality/availability	YPD medium (15h) (diauxic shift)	1.16727018025885
			Indirect	RNA-seq - wt vs TF overexpression	Negative	CEN.PK2-1D	Carbon source quality/availability	YPD medium (36h) (post-diauxic shift)	-1.87422862151519
			Indirect	RNA-seq analysis - TF Over-expression vs WT	Positive	cen.pk-2-1C	Unstressed log-phase growth (control)	RNA extraction at 15h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase.	2.24586339812611
			Indirect	RNA-seq analysis - TF Over-expression vs WT	Negative	cen.pk-2-1C	Carbon source quality/availability	RNA extraction at 36h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase.	-3.66605548646817