Yeastract
YEASTRACT+ INESC-ID IST IBB
Home > Go Back > View Contact/Credits     Tutorial     Help

 

Back to top top

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Gln3p YGR121C PubMed external link Marini AM et al., Molecular and cellular biology, 1997 Aug;17(8):4282-93Marini AM et al., Molecular and cellular biology, 1997 Aug;17(8):4282-93 Indirect lacZ - wt vs TF mutant Positive S288c Nitrogen source quality/availability 0,1% Glutamine (nitrogen source) N/A
PubMed external link Cox KH et al., Yeast (Chichester, England), 1999 Jun 15;15(8):703-13Cox KH et al., Yeast (Chichester, England), 1999 Jun 15;15(8):703-13 Indirect Microarray analysis - wt vs TF mutant Negative TCY1 Nitrogen source quality/availability Wickerham's minimal medium with 0,6% glucose and 0,1% of proline N/A
PubMed external link Staschke KA et al., The Journal of biological chemistry, 2010 May 28;285(22):16893-911Staschke KA et al., The Journal of biological chemistry, 2010 May 28;285(22):16893-911 Indirect Microarray analysis - WT vs TF Deletion Positive WY798 Nitrogen source quality/availability Grown in synthetic medium (SD) (2% dextrose, 0.5% ammonium sulfate) + amino acids w/o histidine (SC medium). Cells treated for 1 h with 10 mM 3-AT. Transcription factor gene deletion. 0.18903382
Indirect Microarray analysis - WT vs TF Deletion Positive WY798 Nitrogen source quality/availability Grown in synthetic medium (SD) (2% dextrose, 0.5% ammonium sulfate) + amino acids w/o histidine (SC medium). Cells treated for 1 h with 200 nM rapamycin. Transcription factor gene deletion. 0.0
Indirect Microarray analysis - WT vs TF Deletion Positive WY798 Unstressed log-phase growth (control) Grown in synthetic medium (SD) (2% dextrose, 0.5% ammonium sulfate) + amino acids w/o histidine (SC medium). Transcription factor gene deletion. 1.14997147
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 Unstressed log-phase growth (control) YPD medium, 25.C N/A
PubMed external link Hurieva B et al., Nucleic acids research, 2024 Aug 27;52(15):8763-8777Hurieva B et al., Nucleic acids research, 2024 Aug 27;52(15):8763-8777 Direct ChEC-seq - wt vs TF truncations N/A BY4741 Unstressed log-phase growth (control) SD medium N/A