Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Ixr1p YHL001W PubMed external link Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804 Direct Chip-on-chip N/A S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Vizoso-Vázquez A et al., Applied microbiology and biotechnology, 2012 Apr;94(1):173-84Vizoso-Vázquez A et al., Applied microbiology and biotechnology, 2012 Apr;94(1):173-84 Indirect Microarray analysis - WT vs TF Deletion Negative BY4741 Oxygen availability Grown in SC medium with defined amino acid supplements and 2% glucose at 30 °C, in Erlenmeyer flasks filled to 40% volume and shaken at 250 rpm. Cells incubated overnight in anaerobic jars with ergosterol and Tween 80 supplementation, 20 mg/L ergosterol and 0.5%, respectively. Transcription factor gene deletion in hypoxic condition. -1.24878808
Indirect Microarray analysis - WT vs TF Deletion Negative BY4741 Oxygen availability Grown in SC medium with defined amino acid supplements and 2% glucose at 30 °C, in Erlenmeyer flasks filled to 40% volume and shaken at 250 rpm. Cells shifted from aerobic to hypoxic conditions at OD600 0.8 by nitrogen bubbling for 3 hours. Transcription factor gene deletion in hypoxic condition. N/A
PubMed external link Krakowiak J et al., eLife, 2018 Feb 2;7():Krakowiak J et al., eLife, 2018 Feb 2;7(): Indirect Microarray analysis - wt vs TF mutant N/A W303 Unstressed log-phase growth (control) SD medium N/A