S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Gln3p	YHR208W	PubMed Staschke KA et al., The Journal of biological chemistry, 2010 May 28;285(22):16893-911	Indirect	Microarray analysis - wt vs TF mutant	Positive	EG328-1A	Nitrogen source quality/availability	RNA prepared from wt and DELTAgcn2DELTAgln3 cells treated for 1 h with 10 mM 3-AT	N/A
			Indirect	Microarray analysis - wt vs TF mutant	Positive	EG328-1A	Stress	RNA prepared from wt and DELTAgcn2DELTAgln3 cells treated for 1 h with 200 nM Rapamycin	N/A
			Indirect	Microarray analysis - wt vs TF mutant	Positive	EG328-1A	Nitrogen source quality/availability	RNA prepared from wt and DELTAgcn4DELTAgln3 cells treated for 1 h with 10 mM 3-AT	N/A
			Indirect	Microarray analysis - wt vs TF mutant	Positive	EG328-1A	Stress	RNA prepared from wt and DELTAgcn4DELTAgln3 cells treated for 1 h with 200 nM Rapamycin	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	-0.4161763589669
		PubMed González J et al., Genetics, 2017 Nov;207(3):975-991	Indirect	Northern blot - wt vs TF mutant	Positive	CLA11-700	Nitrogen source quality/availability	MM medium with 2% glucose with glutamine (7 mM)	N/A
			Indirect	Northern blot - wt vs TF mutant	Positive	CLA11-700	Nitrogen source quality/availability	MM medium with 2% glucose with valine (150 mg/liter), isoleucine (30 mg/liter) and leucine (100 mg/liter)	N/A
			Indirect	Northern blot - wt vs TF mutant	Positive	CLA11-700	Nitrogen source quality/availability	Cells grown to OD600 0.5 on MM with 2% glucose with Glutamine (biosynthetic conditions)	N/A
			Indirect	Northern blot - wt vs TF mutant	Positive	CLA11-700	Nitrogen source quality/availability	Cells grown to OD600 0.5 on MM with 2% glucose with VIL (valine plus isoleucine plus leucine) (catabolic conditions)	N/A