S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Cbf1p	YIL033C	PubMed Moxley JF et al., Proceedings of the National Academy of Sciences of the United States of America, 2009 Apr 21;106(16):6477-82	Indirect	Microarray analysis - wt vs TF mutant	Negative	BY4741	Unstressed log-phase growth (control)	YNB media supplemented with 20 mg/L methionine	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	-0.32009182007729
		PubMed Holland P et al., Nucleic acids research, 2019 Jun 4;47(10):4986-5000	Direct	ChIP-exo	N/A	CEN.PK 113-5D	Carbon source quality/availability	Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h	N/A
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Carbon source quality/availability	Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h	N/A
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Nitrogen source quality/availability	Cells were cultivated in chemostats in nitrogen limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h	N/A
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Carbon source quality/availability	Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h	N/A