Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Mss11p YIR019C PubMed external link Gagiano M et al., Journal of bacteriology, 1999 Oct;181(20):6497-508Gagiano M et al., Journal of bacteriology, 1999 Oct;181(20):6497-508 Indirect lacZ - wt vs TF overexpression Positive S288c Carbon source quality/availability SCGE (3% glycerol 3% ethanol) medium N/A
PubMed external link van Dyk D et al., Genetics, 2005 Jan;169(1):91-106van Dyk D et al., Genetics, 2005 Jan;169(1):91-106 Indirect Northern blot - wt vs TF overexpression Positive S288c Unstressed log-phase growth (control) SCD medium N/A
PubMed external link Bester MC et al., Current genetics, 2006 Jun;49(6):375-83Bester MC et al., Current genetics, 2006 Jun;49(6):375-83 Indirect Northern blot - wt vs TF overexpression Positive S288c Carbon source quality/availability cells grown to stationary phase in synthetic medium N/A
PubMed external link Barrales RR et al., Genetics, 2008 Jan;178(1):145-56Barrales RR et al., Genetics, 2008 Jan;178(1):145-56 Indirect Northern blot - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Chavel CA et al., PLoS genetics, 2010 Mar 19;6(3):e1000883Chavel CA et al., PLoS genetics, 2010 Mar 19;6(3):e1000883 Indirect RT-PCR - wt vs TF mutant Negative SIGMA1278b Carbon source quality/availability wt vs DELTAmss11: total RNA was isolated from 25 ml cultures grown in YEP GAL for 8h. N/A
PubMed external link Bester MC et al., G3 (Bethesda, Md.), 2012 Jan;2(1):131-41Bester MC et al., G3 (Bethesda, Md.), 2012 Jan;2(1):131-41 Indirect Microarray analysis - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) Minimal medium; mid-log phase N/A
PubMed external link Judeh T et al., Nucleic acids research, 2013 Feb 1;41(3):1425-37Judeh T et al., Nucleic acids research, 2013 Feb 1;41(3):1425-37 Indirect Microarray analysis - wt vs TF mutant Positive S288c Nitrogen source quality/availability nitrogen stress N/A
PubMed external link Scherz K et al., G3 (Bethesda, Md.), 2014 Jul 9;4(9):1671-80Scherz K et al., G3 (Bethesda, Md.), 2014 Jul 9;4(9):1671-80 Indirect Northern blot - wt vs TF mutant Positive S288c Cell cycle/morphology DELTAmss11 grown for 96 hr in square 120-mm · 120-mm Petri dishes in Synthetic complete (SC) media and amino acids: adenine sulfate 20 mg/liter; uracil 38 mg/liter; Lhistidine 38 mg/liter; L-arginine 38 mg/liter; L-tryptophan 38 mg/liter; L-methoinine 38 mg/liter; L-tyrosine 15 mg/liter; L-leucine 57 mg/liter;L-isoleucine 57 mg/liter; L-lysine 57 mg/liter; L-phenylalanine 48 mg/liter; L-valine 57 m N/A
PubMed external link Mayhew D et al., Molecular biology of the cell, 2014 Sep 1;25(17):2669-76Mayhew D et al., Molecular biology of the cell, 2014 Sep 1;25(17):2669-76 Direct Multiplex calling card analysis N/A S288c Nitrogen source quality/availability Nitrogen starvation N/A