S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Gln3p	YIR031C	PubMed Cooper TG et al., Journal of bacteriology, 1990 Feb;172(2):1014-8	Indirect	Northern blot - wt vs TF mutant	Positive	AM100	Nitrogen source quality/availability	Minimal glucose proline medium	N/A
		PubMed Hagen DC et al., Molecular and cellular biology, 1993 Nov;13(11):6866-75	Indirect	Northern blot - wt vs TF mutant	Positive	SIGMA1278b	Nitrogen source quality/availability	Wickerham's minimal medium + proline	N/A
		PubMed Cox KH et al., Yeast (Chichester, England), 1999 Jun 15;15(8):703-13	Indirect	Microarray analysis - wt vs TF mutant	Negative	TCY1	Nitrogen source quality/availability	Wickerham's minimal medium with 0,6% glucose and 0,1% of proline	N/A
		PubMed Rai R et al., The Journal of biological chemistry, 1999 Sep 24;274(39):28026-34	Indirect	lacZ - wt vs TF mutant	Positive	S288c	Nitrogen source quality/availability	media 2% glucose + 0.1 % ?-aminobutyric acid	N/A
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	N/A	N/A	N/A
		PubMed Staschke KA et al., The Journal of biological chemistry, 2010 May 28;285(22):16893-911	Indirect	Microarray analysis - WT vs TF Deletion	Negative	WY798	Nitrogen source quality/availability	Grown in synthetic medium (SD) (2% dextrose, 0.5% ammonium sulfate) + amino acids w/o histidine (SC medium). Cells treated for 1 h with 200 nM rapamycin. Transcription factor gene deletion.	-0.08406426
		PubMed Hurieva B et al., Nucleic acids research, 2024 Aug 27;52(15):8763-8777	Direct	ChEC-seq - wt vs TF truncations	N/A	BY4741	Unstressed log-phase growth (control)	SD medium	N/A