Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Msn4p YJL141C PubMed external link Smith A et al., The EMBO journal, 1998 Jul 1;17(13):3556-64Smith A et al., The EMBO journal, 1998 Jul 1;17(13):3556-64 Indirect Northern blot - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) SC medium; mid-log phase N/A
PubMed external link Lai LC et al., Molecular and cellular biology, 2005 May;25(10):4075-91Lai LC et al., Molecular and cellular biology, 2005 May;25(10):4075-91 Indirect Microarray analysis - wt vs TF mutant Positive S288c Oxygen availability SSGal-TEA medium + anaerobiosis (0,08 generations) N/A
PubMed external link Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6 Indirect Microarray analysis - wt vs TF mutant Positive S288c Stress YPD medium + 0,4M KCl (salt stress) N/A
PubMed external link Hazelwood LA et al., Applied and environmental microbiology, 2009 Nov;75(21):6876-85Hazelwood LA et al., Applied and environmental microbiology, 2009 Nov;75(21):6876-85 Indirect Microarray analysis - wt vs TF mutant Positive IMZ066 Nitrogen source quality/availability Nitrogen-limiting (45 g/L glucose, 1 g/L (NH4)2SO4, 5.3 g/L K2SO4, 3 KH2PO4, 0.5 g/L MgSO4.7H2O, 0.0045 g/L ZnSO4.7H2O) N/A
PubMed external link Casado C et al., The Biochemical journal, 2011 Sep 15;438(3):523-33Casado C et al., The Biochemical journal, 2011 Sep 15;438(3):523-33 Indirect Microarray analysis - wt vs TF mutant Positive S288c Stress 10 min shift to pH=8 N/A