S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Pho2p	YJL161W	PubMed Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Fendt SM et al., Molecular systems biology, 2010 Nov 30;6():432	Indirect	Microarray analysis - WT vs TF Deletion	Negative	FY4	Unstressed log-phase growth (control)	Grown in minimal medium batch cultures with 10 g/L glucose at 30°C, 300 rpm and exponential growth. Transcription factor gene deletion.	-0.623
		PubMed He BZ et al., eLife, 2017 May 9;6():He BZ et al., eLife, 2017 May 9;6():	Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	K699	Unstressed log-phase growth (control)	100 ml of cell culture grown to OD600nm (600 nm) of 1.5.	-1.2719952391206
			Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	K699	Ion/metal/phosphate/sulfur/vitamin availability	Grown in phosphate-free SC medium (Phosphate starvation) at 30°C with shaking. All transcriptional profiling experiments were done in the pho80∆ background. Transcription factor gene deletion.	-1.2719952391206