Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Put3p YJR148W PubMed external link Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50 Indirect Microarray analysis - wt vs TF overexpression Negative N/A Carbon source quality/availability Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h N/A
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Positive BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. 0.64845676092725
PubMed external link González J et al., Genetics, 2017 Nov;207(3):975-991González J et al., Genetics, 2017 Nov;207(3):975-991 Direct ChIP N/A CLA11-700 Nitrogen source quality/availability MM medium with 2% glucose with glutamine (7 mM) N/A
Direct ChIP N/A CLA11-700 Nitrogen source quality/availability MM medium with 2% glucose with valine (150 mg/liter), isoleucine (30 mg/liter) and leucine (100 mg/liter) N/A
Direct ChIP N/A CLA11-700 Nitrogen source quality/availability Cells grown to OD600 0.5 on MM with 2% glucose with Glutamine (biosynthetic conditions) N/A
Direct ChIP N/A CLA11-700 Nitrogen source quality/availability Cells grown to OD600 0.5 on MM with 2% glucose with VIL (valine plus isoleucine plus leucine) (catabolic conditions) N/A
Direct ChIP N/A CLA11-700 Nitrogen source quality/availability Cells grown to OD600 0.5 on MM with 2% glucose with GABA N/A
Indirect Northern blot - wt vs TF mutant Positive CLA11-700 Nitrogen source quality/availability MM medium with 2% glucose with valine (150 mg/liter), isoleucine (30 mg/liter) and leucine (100 mg/liter) N/A
Indirect Northern blot - wt vs TF mutant Positive CLA11-700 Nitrogen source quality/availability Cells grown to OD600 0.5 on MM with 2% glucose with VIL (valine plus isoleucine plus leucine) (catabolic conditions) N/A