S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Gzf3p	YKR039W	PubMed Soussi-Boudekou S et al., Molecular microbiology, 1997 Mar;23(6):1157-68	Indirect	lacZ - wt vs TF mutant	Positive	SIGMA1278b	Nitrogen source quality/availability	Minimal medium + glutamine	N/A
			Indirect	lacZ - wt vs TF mutant	Positive	SIGMA1278b	Unstressed log-phase growth (control)	Minimal medium + NH4+	N/A
		PubMed Coffman JA et al., Journal of bacteriology, 1997 Jun;179(11):3416-29	Indirect	Northern blot - wt vs TF mutant	Negative	TCY1	Nitrogen source quality/availability	Minimal medium + glutamine	N/A
		PubMed Georis I et al., Molecular and cellular biology, 2009 Jul;29(13):3803-15	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Nitrogen source quality/availability	Exponential-phase cells cultivated in synthetic growth medium containing 0.1% proline as nitrogen source	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	-0.9117804622616
		PubMed Deed NK et al., Applied microbiology and biotechnology, 2011 Mar;89(5):1537-49	Indirect	Microarray analysis - wt vs TF mutant	Negative	S288c	Complex industrial media	wine fermentation exponential phase	N/A
		PubMed Miller D et al., PLoS genetics, 2018 May;14(5):e1007406	Indirect	Barseq after FACS after mRNA FISH (BFF)	Negative	FY4	Nitrogen source quality/availability	400 microM glutamine added to a culture of yeast cells growing in minimal media containing 800microM proline as a sole nitrogen source	N/A
		PubMed Sato A et al., Bioscience, biotechnology, and biochemistry, 2021 Feb 24;85(3):587-599	Indirect	RT-PCR - wt vs. TF double mutant	Negative	X2180-1B	Unstressed log-phase growth (control)	YPD medium	N/A