Yeastract
YEASTRACT+ INESC-ID IST IBB
Home > Go Back > View Contact/Credits     Tutorial     Help

 

Back to top top

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Swi5p YLR079W PubMed external link Ozcan S et al., Molecular and cellular biology, 1996 Oct;16(10):5536-45Ozcan S et al., Molecular and cellular biology, 1996 Oct;16(10):5536-45 Indirect Northern blot - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) YEP 2% raffinose N/A
PubMed external link Toyn JH et al., Genetics, 1997 Jan;145(1):85-96Toyn JH et al., Genetics, 1997 Jan;145(1):85-96 Indirect Northern blot - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) 5h growth after 2% galactose was added to log phase cultures growing in YP raffinose in a CLB2-overexpressing strain (cells arrested at telophase) N/A
PubMed external link Aerne BL et al., Molecular biology of the cell, 1998 Apr;9(4):945-56Aerne BL et al., Molecular biology of the cell, 1998 Apr;9(4):945-56 Indirect Northern blot - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link McBride HJ et al., The Journal of biological chemistry, 1999 Jul 23;274(30):21029-36McBride HJ et al., The Journal of biological chemistry, 1999 Jul 23;274(30):21029-36 Direct DNA footprinting Positive W303 Unstressed log-phase growth (control) Exponential-phase cells cultivated in synthetic growth medium N/A
PubMed external link Madhani HD et al., Proceedings of the National Academy of Sciences of the United States of America, 1999 Oct 26;96(22):12530-5Madhani HD et al., Proceedings of the National Academy of Sciences of the United States of America, 1999 Oct 26;96(22):12530-5 Direct ChIP N/A S288c Cell cycle/morphology Exponential phase cells cultivated in YPD growth medium (40 minutes after cell-cycle synchronization) N/A
PubMed external link Simon I et al., Cell, 2001 Sep 21;106(6):697-708Simon I et al., Cell, 2001 Sep 21;106(6):697-708 Direct Chip-on-chip N/A S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804 Direct Chip-on-chip N/A S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Workman CT et al., Science (New York, N.Y.), 2006 May 19;312(5776):1054-9Workman CT et al., Science (New York, N.Y.), 2006 May 19;312(5776):1054-9 Direct Chip-on-chip N/A S288c N/A N/A N/A
PubMed external link Voth WP et al., The EMBO journal, 2007 Oct 17;26(20):4324-34Voth WP et al., The EMBO journal, 2007 Oct 17;26(20):4324-34 Direct ChIP N/A S288c N/A N/A N/A
PubMed external link Cocklin R et al., Genetics, 2011 Mar;187(3):701-15Cocklin R et al., Genetics, 2011 Mar;187(3):701-15 Indirect Western blot - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 Unstressed log-phase growth (control) YPD medium, 25.C N/A