S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Gat1p	YLR155C	PubMed Oliveira EM et al., Yeast (Chichester, England), 2003 Jan 15;20(1):31-7	Indirect	Northern blot - wt vs TF mutant	Positive	P40-1B	Nitrogen source quality/availability	Cells grown in YNBGlu medium with 0.2% proline as the sole nitrogen source	N/A
			Indirect	Northern blot - wt vs TF mutant	Positive	P40-1B	Nitrogen source quality/availability	Nitrogen starvation; exponential cells grown in YNBGlu medium containing 0.9% ammonium sulphate or 0.2% proline as the sole nitrogen source washed and incubated in a 3% glucose solution for 2 h	N/A
			Indirect	Northern blot WT vs TF deletion mutant	Positive	FY1679-28C	Nitrogen source quality/availability	Cells grown in YNBGlu medium with 0.2% proline as the sole nitrogen source	N/A
			Indirect	Northern blot WT vs TF deletion mutant	Positive	FY1679-28C	Nitrogen source quality/availability	Nitrogen starvation; exponential cells grown in YNBGlu medium containing 0.9% ammonium sulphate or 0.2% proline as the sole nitrogen source washed and incubated in a 3% glucose solution for 2 h	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	-0.47450269436779
		PubMed Huang YC et al., RNA (New York, N.Y.), 2010 Nov;16(11):2085-93	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	Nitrogen source quality/availability	Rapamycin treatment	N/A
			Indirect	Northern blot - wt vs TF mutant	Positive	S288c	Nitrogen source quality/availability	Without NH4+	N/A