S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Mac1p	YLR213C	PubMed Dormer UH et al., The Journal of biological chemistry, 2000 Oct 20;275(42):32611-6	N/A		N/A	S288c	N/A	N/A	N/A
		PubMed Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Workman CT et al., Science (New York, N.Y.), 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A	N/A	N/A
		PubMed James Theoga Raj C et al., The Journal of biological chemistry, 2019 Apr 5;294(14):5562-5575	Indirect	RNA-seq analysis - WT vs TF Deletion	N/A	BY4742	Unstressed log-phase growth (control)	Grown in liquid synthetic minimal medium (YNB) with arginine at 30°C overnight, diluted and cultivated to mid-log phase before isolation of total RNA. 10 mM 3-amino-triazole (3AT) was added to cultures grown to mid-log phase for further 8 h. Transcription factor gene deletion.	-2.00998993621977
			Indirect	RNA-seq analysis - WT vs TF Deletion	N/A	BY4742	Unstressed log-phase growth (control)	Grown in SD medium. Transcription factor gene deletion.	-2.00998993621977
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	Unstressed log-phase growth (control)	YPD medium, 25.C	N/A